Mangifera indica (mango): 123197304
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Entry
123197304 CDS
T07684
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Pathway
minc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123197304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123197304
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123197304
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123197304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
WW
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
123197304
NCBI-ProteinID:
XP_044467466
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Position
15:complement(10991142..10996786)
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AA seq
442 aa
AA seq
DB search
MAAAATASSIRYAPEDPSLPKPWKGLVDGRTGYLYFWNPETNVTQYQRPSNLAPPPRSSS
VPISSSVQVEQSSEGQHRDCSPEKEDDRYGRRTIGGSKLDVGSRRNQSLRGAPIQSHNVP
NGIASVRHGGLSMRGYGSSNAAVSLFPDAYCQQHKITVISKKRKKEKFGDRPRGHGKGDA
NCCARRMTQPAGAGSSKAVPFSLIVSDPELFDCPICLEPLTIPVFQCEDGHIVCSVCCGQ
LSVCPTCSLPVGYIRCRAIEKVLESVKVRCPNTKYGCNETMSYNLMSDHELTCQYMPCSC
PLSDCNFIGTPAKLHQHVSVKHRNSVVSFTYNRVVSISLNVNHKFIVLLEEKNADLFILN
NMSESGGNVMSVTCIGQPGKKAVVYNLLARSGGSTYKFQSITRTIQKKEEKVSDLEKDFL
LPSDLFGYYGQLNLEVRIYSRK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgcaactgcctctagtatcagatatgcaccagaggaccccagtctcccc
aaaccatggaaaggcctcgtagatggtagaactgggtatctttacttttggaatccagag
acaaatgtaacccagtatcagaggccttcaaatttggctcctccgccaaggtcttcctca
gtgccaataagctcttctgtacaagttgaacaatcttcagaaggacaacatcgcgattgt
agtcctgaaaaggaagatgataggtatggtcgacggaccattggtggatcaaagcttgat
gttggctcgaggagaaatcagagcttaagaggagcacctattcaatcacataatgtccca
aatggaatagcaagtgtgagacatggaggattgtctatgagaggttatggttcgtcaaat
gcagcagtcagtttgtttcctgatgcttattgccagcaacataagataactgtgattagt
aaaaaacgaaaaaaggaaaaatttggagatagaccacgaggacatgggaaaggggatgca
aattgttgtgcaagaagaatgactcaaccggcaggagcaggaagttcaaaagctgttcct
ttttctttgattgtatctgacccggaacttttcgattgcccaatatgcttagagcccttg
acaattcctgtatttcagtgtgaagatgggcacatagtttgttctgtttgctgcggtcaa
ttgagtgtatgtcctacctgcagtttgccggttggatatattcgttgtagggcaatcgag
aaagttttagagtctgtcaaagtaagatgcccaaacacaaagtatggatgcaatgaaaca
atgagttacaacctgatgagtgatcacgaactgacatgccagtatatgccttgttcgtgt
ccactttcagattgcaatttcatcggtacacctgccaagttacaccaacatgttagtgtg
aaacatcggaattcagttgtttctttcacatacaacagagtcgtaagcatatctttgaat
gttaatcataagttcattgtccttctagaagagaaaaatgctgaccttttcattctcaac
aatatgtctgaatctggagggaacgtaatgtcagttacttgtattggtcaaccagggaaa
aaggcagtagtttataacttgttggcaaggtctggtggaagtacgtataaatttcaatcg
ataacaaggaccatacagaaaaaggaagaaaaagtgtctgatttggaaaaagactttttg
ttaccaagtgatctcttcggatactatggacaacttaacttagaggtccgtatatattca
agaaagtaa
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