Mangifera indica (mango): 123204520
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Entry
123204520 CDS
T07684
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123204520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123204520
03036 Chromosome and associated proteins [BR:
minc03036
]
123204520
Spliceosome [BR:
minc03041
]
Complex B
Other components
Prp19-related factors
123204520
Complex C
123204520
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
123204520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_2
HAT_Syf1_M
TPR_8
TPR_17
ARM_TT21
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
123204520
NCBI-ProteinID:
XP_044477161
LinkDB
All DBs
Position
20:12202186..12207970
Genome browser
AA seq
705 aa
AA seq
DB search
MASKDADPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQ
KITDSTELAEYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFERARSVWERALEVD
YRNHTLWLKYAEVEMKNKFINRARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQI
FERWMNWMPDQQGWLSYIKFELRYNEVDRARQIFERFVQCHPKVTAWIRYAKFEMKNGEV
DRARNVYERAVEKLADDEEAELLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLY
RKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKNPMNYDTWFDYVRLEESVGNKERIRE
VYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAEDMERTRDIYSECLKLIPHKKFSF
AKIWLMAAQFEIRQLNLNGARQILGNAIGQAPKDKIFKKYIEIELQLGNMDRCRKLYEKY
LEWSPENCYAWSKFAELERSLDETERARAIFELAIVQPALDMPELLWKAYIDFEISEGEF
NRTRALYERLLDRTKHLKVWISYAKFEASAMREDGGGSELAENDGQEDFLEQKKQCIQNA
RRVFEKAVNYFRTSAPELKEERAMLLEEWLNMESSCGALGDVSLVQAKLPKKLKKRRQIV
SDDGLSAGYEEYIDYLFPEESQSTNLKILEAAYRWKKQKIASDDD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaagatgcggatccttctctgggatatctcacgcgcaaggacacggaggtg
aaactcccgcggccgactagagtcaagaacaaaacgccagctccgatacaaatcactgcg
gaacaaattttacgtgaagctcgggaacgtcaagaggctgaaattcgaccacctaaacag
aaaatcactgactctactgagcttgctgagtatcgccttcgaaagaggaaagaatttgag
gatttaattcgtagagttcgctggaatattagtgtgtggattaagtatgcccaatgggag
gagtctcagaaagattttgagcgtgcacgaagcgtgtgggaacgtgcattggaagttgat
taccggaatcacactctttggttgaagtatgctgaggtagagatgaagaacaagttcatt
aacagggcacggaatgtttgggatcgtgcagtgacattgttaccccgtgtggatcaacta
tggtataaatatattcacatggaagagatgcttgggaatgttgctggagctaggcagatt
tttgaaaggtggatgaattggatgcctgatcagcaagggtggttatcatatatcaaattt
gagcttcgatataatgaagttgaccgagctaggcagatttttgaacggtttgttcagtgc
catccaaaagttacagcatggattcgatatgccaagtttgagatgaaaaatggagaagtt
gatcgtgcaaggaatgtttatgaacgtgcagtggagaaattggcggatgacgaagaggct
gagttattgtttgttgcatttgcagagtttgaggagagatgtaaggagacagagcgtgct
aggtgcatttataagtttgcattggaccatatacctaaaggcagggctgaagacttatat
agaaagtttgtggcttttgagaaacagtatggggataaggaagggattgaggatgctatt
gtgggaaagaggaggtttcaatacgaggatgaagtgagaaagaatccaatgaattatgac
acatggtttgactacgttaggttagaagagagtgtaggaaataaggaaaggattagggag
gtttatgagcgtgccattgctaatgtgccaccagcggaggagaagagatattggcaaaga
tatatatacttgtggattaattatgcgttgtatgaggaactggatgcagaagatatggaa
cggacacgagacatttatagtgagtgcctgaagctaattccacataaaaagttttcattt
gcaaagatctggctcatggctgcccagtttgaaataaggcaattaaatctcaatggtgcc
cgacaaattttagggaatgcaattggacaagctcctaaggataagatatttaaaaaatac
attgaaatagagttgcagcttggtaatatggaccgatgccgaaagctttatgaaaagtac
ttggaatggtcaccagagaactgctatgcttggagcaaatttgcggaactggagagatct
ttggatgaaacagagcgagctagggctatttttgagcttgcaattgtgcagcccgctttg
gatatgcctgagttgttgtggaaggcgtatattgactttgagatatcagaaggtgagttt
aatagaacgagagccctttatgagagactcttggatcggacaaaacatttaaaggtttgg
attagttatgcaaagtttgaggcttctgctatgagggaggatggtgggggctcagagttg
gcagaaaatgatggccaggaagatttccttgaacaaaagaagcaatgcattcagaatgca
cggagagtctttgaaaaagcagttaactatttcagaacgtcagctcctgaattgaaggaa
gaaagggctatgttgttagaagagtggttgaacatggagagtagctgtggtgcgcttggt
gatgttagcttagtccaggctaagctaccgaagaaacttaagaagagaaggcaaattgtc
agtgatgatgggctgtcagctgggtatgaagagtacatagactatctgttccctgaggaa
tcccagagtacaaatctgaagatcttggaggctgcatacagatggaagaaacagaagatt
gcttctgatgatgattag
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