Mangifera indica (mango): 123214435
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Entry
123214435 CDS
T07684
Name
(RefSeq) adagio protein 3-like
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
minc
Mangifera indica (mango)
Pathway
minc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123214435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123214435
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123214435
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_2
Kelch_5
Kelch_1
PAS_9
Kelch_6
NANM
F-box-like
PAS_3
PAS
F-box
PAS_4
Motif
Other DBs
NCBI-GeneID:
123214435
NCBI-ProteinID:
XP_044490126
LinkDB
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Position
4:complement(3087663..3093459)
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AA seq
626 aa
AA seq
DB search
MSSKKEEDNEDEIRSSVKRQKCTSNEAEERDGEESELPLEKGFFFYPSTPTSFVVSDALE
PDFPIIYVNKVFEISTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPFVVSEIRRCLEEG
IEFQGELLNFKKDGTALVNRLRLAPMHDDDGIVTHIIGIQVFSEAKIDLNHVSYPVFKET
CNQQYDQSAQYSSLSGQSSFIQHQEICGMLQLSDEVLAHNILSRLTPRDVASIGSVCRRI
RQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKLTVGGAVE
PSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAENPEWQRVSVKSSPPGRWGHTL
TCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVSGGTPPLPRSWHSSCTIEGSKL
VVTGGCTDAGVLLSDTYLLDLTTEKPMWREILTSFTPPSRLGHSLSVYGRTKVLMFGGLA
SSGHLRLRSGDSYTIDFGDEEPQWKQLECSAFSGVGSQSVVVPPPRLDHVAVSMPCGRII
IFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHT
GEEWLLNELHELCLASRQDSDPDPDP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtaaaaaggaagaagacaacgaggacgagattcggagctccgtaaagcgtcag
aaatgcacttcaaacgaagcggaggagcgcgacggggaggagagtgaacttccgttggag
aaaggtttcttcttctatccgagcactccgacgtcatttgtggtttccgatgctctagag
cctgattttcctattatttacgtcaacaaagttttcgagatctccaccggttaccgcgca
gatgaagtcctcggtcgaaactgtcggttcttacaatatagggatcctcgtgctcaaaga
cgacaccctttggtagatccttttgttgtttcagagatcagaagatgtcttgaggaaggt
atcgaattccaaggtgagttactcaattttaagaaagatggtactgcactggtgaacagg
ctaagacttgcacccatgcatgatgatgatgggattgtcactcacataatcggtattcaa
gtgttctctgaggcaaaaatagatttgaatcatgtatcttatccagtattcaaagagacc
tgcaatcagcagtatgatcagtcggctcaatatagttctctgagtgggcaatcatcattc
attcaacatcaagaaatatgtggaatgcttcaactctcagatgaagttttggctcataac
attttatcacgcctgacaccaagggatgttgcatctattggatctgtctgtagaaggata
cgccagttgacaaagaatgaacatgtaaggaagatggtgtgtcaaaatgcatggggaagg
gaagtgactggtgcattagaactgatgaccaagaagttagggtggggacgtttggctagg
gaattgactacccttgaggcagtttgttggagaaaacttacggttggaggagcagtggag
ccttcacgttgcaattttagtgcctgtgccgccggcaatcgactagtactgtttggaggg
gaaggagtcaatatgcagccaatggatgacacatttgttctgaatcttgatgcagaaaat
ccagaatggcagcgagttagcgttaaatcatctccaccgggacgttggggccacactctc
acctgtctgaatggttcctggttggtggtatttggtggatgtggaaggcaaggattgctc
aacgacgtatttgttctcgatttggatgccaaacaaccaacatggaaagaagtttctggt
gggactccccctcttcctagatcttggcatagttcttgcactatagaaggttctaaattg
gtggtaacaggtgggtgcactgatgctggggttcttcttagtgacacgtacttattggat
ctcactactgagaagccaatgtggagagaaatactcacttcatttactcctccttccaga
ttaggacattctctctcagtttatggtcgaacaaaagttctgatgtttggtgggcttgct
agtagtgggcatttgcgactgcgatcaggtgattcttataccattgattttggagatgaa
gaaccacagtggaagcaactggaatgtagtgcattctcaggagtgggcagccagagtgtt
gtggttcccccacctagacttgaccatgttgctgtcagcatgccttgtggaaggattatc
atctttggtggttccattgctgggctgcactctccatctcagctcttccttctagatcct
tctgaggagaaaccgtcttggagaatcctcaatgttcctggtcagccacctaaatttgct
tggggtcacagcacctgtgtggtcggagggacaagggttctggtattaggtggacacact
ggagaggagtggttgcttaacgaattgcatgagttgtgcctagccagcagacaagactca
gatccagacccagacccatag
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