Mangifera indica (mango): 123219199
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Entry
123219199 CDS
T07684
Name
(RefSeq) pumilio homolog 5 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
minc
Mangifera indica (mango)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
NABP
DUF445
Motif
Other DBs
NCBI-GeneID:
123219199
NCBI-ProteinID:
XP_044496928
LinkDB
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Position
6:complement(4380070..4392854)
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AA seq
1025 aa
AA seq
DB search
MSLCQSKKVANYPLNQMATESPMRMVESGGARNWPSSKDSAMCGSQWKNMAAEELGLLLK
GHRFHRDQTEMIPNRSGSAPPSMEGSFAAIGNLFAKQNSGLNIGLESISDDLGHYESEEQ
LRSDPAYFAYYCSNVNLNPRLPLPLISRENRRLVRHIGASGNNWRSTTLDDTGNRTLHMS
RSSLSTHREEPEDDRSPTQASDNRAENSSVFMSGQKTGLVGRHKSLVDLIQEDFPRTPSP
VYNQSRSSSHATTDEPIDRDVHAVTLDVSAINISDVPGSSSSADVCVDTSSLDSHDIALI
SKNDQLATSFSSSTGPDGAGSSQNSQIDDRNTKNAGLEDDMSVIVASHSERIRKKQEEQQ
YHGRVMLQQYPSEQQGTPYHVHSQTVSPGTNHIHNGMEKLSHGHTKFSSIEVQPSMHSPG
LTTPLYATAGTYMPSGNPYYPNFQPSGIYAPHYNIGGYALNSAFLPSFVAGYPPHGPVPM
PLDPTSGPSFNIRTTGVSTAESIPHMGDFQQQKFYGQHGMMVQPSFVNPVQMPYFQHPFG
DAYSASVQQVRLPVSNGAGAQADSSIQKEPSSAAYMGDQKLLSPPNGSLGIPNSRKLGIS
VGGYYGGLPDMGLMAQFPVSPISSPVLPSSPVGGISHPGRRNDLRYPQGSHRNTSIYPGW
QGQRGVNIFEDSKRHTFLEELKSSNAQKFELSDIAGRIVEFSVDQHGSRFIQQKLEHCSV
EDKVSVFKEVLPHASKLMTDVFGNYVIQKFFEHGSPEQRKELADKLVGQMLPLSLQMYGC
RVIQKALEVIELDQKTQLVLELDGHVMRCVRDQNGNHVIQKCIECVPTEKIGFIISAFRG
QVATLSTHPYGCRVIQRVLEYCSDEQQGQCIVDEILESARILAQDQYGNYVTQHVLERGK
SNERSQIISKLAGKIVQLSQHKYASNVVEKCLEYGDAAERELLIEEIIGQSEENDNLLIM
MKDQFANYVVQKILQKCSDKQREALINQIKIHCQALKKYTYGKHIVARFEQLYSAESQAL
ENSEG
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtgtcagagcaaaaaagtggctaattatcccctaaatcaaatggcaacagag
agccctatgagaatggtggaaagtggtggagctagaaactggccatcttccaaggattct
gcaatgtgtggttcccaatggaagaatatggcagcagaggaattgggattgcttctgaag
gggcacagatttcatagagaccaaacagaaatgattcccaatcgaagtggtagtgcccca
ccaagtatggagggttcttttgcagctattggaaacctttttgctaaacagaactctggt
ctgaatataggcttggaaagtataagcgatgatcttggacattatgaatctgaggagcaa
ctgcgttctgatccagcctactttgcttattactgctctaatgtgaacttgaatccacga
cttcctctacctcttatttcacgagagaataggcgcttggtacgccatattggtgcctct
ggcaataattggaggtctactacattagatgatactggcaatagaaccttgcatatgtct
cgaagttccctctccactcatagggaggaaccagaggatgataggtctcctacacaagct
tcagacaacagagcagaaaacagttctgtatttatgtcaggacagaaaacaggtttggtt
gggcggcacaaaagtttggttgatttgatacaggaagatttcccccgtacgccttctcct
gtatataatcagtctcgctcctcaagccatgcaacaacagatgaaccaattgatcgtgat
gttcatgctgtaactttggatgtttctgctatcaacatttcagatgtacctggatcaagt
agctctgctgatgtttgtgtggatacatcttccttagattcacatgatattgcattaata
tccaaaaatgatcaactggccacgtctttttctagttcaacaggtcctgatggagcaggg
tcttctcagaactcacaaattgatgatagaaacacaaaaaatgctggtttggaggatgat
atgtctgttattgttgcttctcattcagagagaattaggaagaaacaagaagagcagcag
tatcatgggagagtcatgctgcaacagtatccgtctgaacagcaaggcaccccgtatcat
gttcacagtcaaacagtgtcaccaggaacaaatcatatccacaatggcatggaaaaactc
tcccatggtcacactaaattctcttctattgaggtacaaccatcgatgcattcccctggt
ctaactactcccttgtatgcgacagcgggaacctatatgccatcaggcaatccatattac
ccgaattttcagccatctggtatatatgccccacactacaatataggtggatatgctctg
aattctgcatttcttccgtcatttgttgctggataccctccccatggtcctgttcctatg
ccattagatcctacttcaggtccaagctttaatattcgaactactggcgtttcaacagca
gaaagcataccacatatgggtgatttccaacagcagaaattctatggacaacatggaatg
atggtgcaaccttcttttgtgaatcctgttcaaatgccatactttcaacacccttttggg
gatgcatacagtgcttcagtccagcaggttaggttgccagtaagtaatggtgctggggct
caagcggattcttcgatacagaaagagccatcttctgctgcttatatgggtgatcagaaa
cttctgtctccaccaaatggtagtctgggtattccaaattctagaaaacttggaatcagt
gttggtggttattatgggggtcttccagacatgggtctcatggcacaatttccagtgtca
cctatttctagtcctgtgttgccatcatcaccagttggtggaataagtcatccaggtcgg
cgaaatgatctgaggtatcctcagggttcacatagaaacaccagtatctatcctggatgg
caagggcagagaggagtaaacatctttgaggactccaagaggcatacatttcttgaagaa
ctgaaatccagcaatgcgcaaaagtttgagctctcagacatagcaggacgtatagtagaa
ttcagtgtggatcaacacgggagtcgatttattcagcagaagctggaacattgcagtgtt
gaagacaaggtgtctgtattcaaagaagttcttccacatgcttcaaaattaatgaccgat
gtctttggtaattatgttattcaaaagttttttgagcatggaagtcctgagcagaggaag
gagcttgcagacaaacttgttggccagatgctgcctttaagtttgcagatgtatggttgc
cgtgtgatacaaaaggcccttgaagtcattgagcttgatcagaaaacacagttagtcctt
gagcttgatgggcatgtcatgagatgtgtacgtgatcagaatgggaatcatgtgatacag
aagtgtatagaatgtgtacctacagagaaaattggatttattatttctgcttttcgaggt
caagttgccacactttctacacatccatatggttgtcgtgttattcagagagttttggaa
tattgttcagatgaacaacaaggtcaatgtatagtggatgaaattttggaatccgcacgt
attcttgctcaggaccagtatgggaactatgttacgcagcatgttctggagaggggaaaa
tccaatgaaagaagccaaattatcagcaagttggctggaaaaatagtacagttgagtcag
cataaatatgcttcaaatgttgttgagaagtgtttggagtatggtgatgccgctgagcgg
gagctcttgattgaggagattattgggcaatctgaagaaaatgacaatttattgataatg
atgaaagaccaatttgctaactatgtggtacagaagattcttcaaaaatgtagcgataag
cagcgagaagcattaatcaatcagataaagattcattgtcaggctctgaagaaatatact
tatgggaaacacatagttgctcggtttgagcaactttacagtgcagaaagccaagcctta
gaaaattcagaagggtag
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