Mangifera indica (mango): 123226409
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Entry
123226409 CDS
T07684
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
minc
Mangifera indica (mango)
Pathway
minc04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
123226409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123226409
Transcription factors [BR:
minc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123226409
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Activator-TraM
RPT
Motif
Other DBs
NCBI-GeneID:
123226409
NCBI-ProteinID:
XP_044506862
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Position
9:complement(749961..753285)
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AA seq
315 aa
AA seq
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MGDCLSDFFDEPELADDDLFAIFESLDTFTNFPPVNETVVSSYQEEKGARLVQESETEPK
SKRQKTSNAATNASDEALQDGQQRVSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQA
SIIGGVVDYINELQQILQSLEAKKQRKVYSEVLSPRIASSPRALPLSPRKPPLSPRLNLP
ISPRTPQPGSPYRPRLQQGHLSPTKPSNSVEPSPCSSSTSSIDSIHELIANSKSAMADVE
VKFSGPNVLLKTVSPRIPGQAVKIIATLEDLSLEILNVNVNTVDETMLNSFTIKIGIECQ
LSAEELAEQIQQTFS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactgtttatccgattttttcgatgaacctgagttggccgatgatgatctcttt
gccatttttgagagtttagataccttcaccaacttccctccagttaatgaaactgttgtc
agctcttatcaagaagaaaagggtgcaaggttggtgcaagaatctgaaactgaacccaag
agcaagagacagaagacttctaatgctgcaaccaatgcctccgatgaagccctccaggat
ggacagcaaagggtttctcacataacggtggagcgcaaccgcagaaagcaaatgaacgag
cacctctctgtgctgagatctcttatgccttgcttctatgtgaaaagaggagatcaagca
tcgataattggaggtgttgttgattacatcaacgagttgcagcagattttgcagtcactt
gaagccaagaagcaaagaaaagtttacagtgaggttttaagccctagaattgcttcaagc
cccagagctttacctcttagtcctagaaaaccgccgctcagtccgagattgaacctgccg
ataagtccgagaaccccacaacccggcagcccttaccggccgaggttgcagcaaggtcac
ctctcgccgacgaagcctagtaattctgttgaaccatctccctgttcttcaagtacttcc
tccattgacagtattcatgagctcatagctaattcaaagtctgccatggctgacgttgag
gtgaagttttccggcccaaacgttcttttgaagacggtttccccgagaattcctggccag
gctgtgaaaataattgccactcttgaagacctctctctggagattctcaatgtgaacgtc
aacactgttgatgaaaccatgctcaactccttcacaatcaagattgggattgaatgccaa
ctgagtgcggaggagctcgctgaacaaatccaacaaacattcagttaa
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