Mangifera indica (mango): 123227535
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Entry
123227535 CDS
T07684
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123227535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123227535
03009 Ribosome biogenesis [BR:
minc03009
]
123227535
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123227535
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
123227535
Pre-60S particles
123227535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT_GCN1
TPR_IPO5
HEAT
TPR_IMB1
TPR_DNAAF5
IBN_N
TOR1L1_N
HEAT_2
CLASP_N
HEAT_EF3_N
HEAT_MROH2B_C
CEP104-like_TOG
PDS5
Vac14_Fab1_bd
TIP120
INTS7_N
Usg
Motif
Other DBs
NCBI-GeneID:
123227535
NCBI-ProteinID:
XP_044508458
LinkDB
All DBs
Position
10:1924027..1936608
Genome browser
AA seq
891 aa
AA seq
DB search
MAAPASWQPQEEGFREICGLLEQQISPTSTADKSQIWQQLQHYSQFPDFNNYLAFILARA
EGKSVEIRQAAGLLLKNNLRTAYKSIAAANLQYIKSELLPCLGAADRRIRSTVGTIISVV
VQLGGISVWPELLQALVNCLDSNDINHMEGAMDALSKICEDLPQALDSDVPGLAERPINI
LLPRFLQFFQSPHTTLRKLSLGSVNQYIMLMPSALYTSMDQYLQGLFVLANDSATEVRKL
VCAAFVQLIEVQPSFLEPHLRNVIEYLLQVNKDADDEVALEACEFWSAYCETQLPPENLK
EFLPRLLPVLLSNMVYADDDESLLEAEEDESLPDRDQDLKPRFHTSRFHGSEDLEDDDDD
IVNVWNLRKCSAAALDVLSNVFGDEILPTLMPIIHAKLATSGDAAWKDREAAVLALGAVA
EGCINGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFVVQEVGHQNGNEQFDKV
LMGLLQRILDTNKRVQEAACSAFATLEEEAAEELAPRLEVILQHLMCAFGKYQRRNLRIV
YDAIGTLADAVGQELNQPTYLEILMPPLITKWQQLPNSDRDLFPLLECFTSIAQALGSGF
TQFALPVFQRCIDIIQTQQLAKVNPVSAGVQYDKEFIVCALDLLSGLVEGLGSGIESLVA
QSNLRELLLQCCMDDAHDVKQSAFALVGDLAKVCPIHLHPRLSEFLDVAAKQLNTSKLRE
TISVANNACWAIGELAIKVRQEVSPVVMTVISSLVLILQHSEELNKSLIENSAITLGRLA
WVCPEMVAPHMEHFMQSWCIALSMIRDDIEKEDAFRGLCAMVKANPSGALSSLVFMCRAI
ASWHEIRSEELHNDVCQVLLGYKQMLRNGAWDQCMSALEPPVKDKLSKYQV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccccgcctcgtggcagcctcaagaagagggttttagagagatctgtggcttg
ttagagcagcagatttcgccgacttcaactgctgacaagtcccagatttggcaacaactc
caacactactctcagttccctgatttcaataactacctcgctttcatcctcgcacgtgcc
gagggcaaatcagtggagattcgacaagctgctggtttgctgctgaaaaataaccttaga
acagcatacaaatctatcgctgctgcaaacctacagtatataaagtcagagttgttgcct
tgtttaggagctgctgataggcgcatcaggtctactgttgggactattatcagtgttgtt
gttcaactaggtgggatttcagtgtggcctgaactgttgcaagctctagtaaattgcttg
gacagtaatgacatcaatcacatggaaggtgctatggacgctttgtccaagatttgtgag
gacttaccccaagcactggattcagatgtacctgggttggctgagcgtcccatcaacatc
ttacttcctcgatttttgcagtttttccagtcaccgcataccactctaagaaaactttcc
ttgggttctgtaaatcaatacatcatgctgatgccttctgctttatatacatccatggat
caataccttcagggtttgtttgttcttgctaatgactctgctacagaagtccgaaaattg
gtttgtgcagcatttgttcagctaatagaagtccaaccatctttcttggaaccgcatcta
aggaatgtaattgaatacttgttacaagtcaacaaggatgctgatgatgaagtggctctt
gaagcttgtgaattctggtctgcatactgtgagacgcaattaccacctgaaaacttgaaa
gaattcttgccacgtctgcttccggttctgctttcaaatatggtttatgctgatgatgat
gagtcacttcttgaagccgaggaggatgagtctctcccagaccgggaccaggatctaaaa
cctcgttttcatacatcacggtttcatggatcagaagatttggaagatgatgatgatgac
attgttaatgtatggaatttacggaagtgcagtgcagcggcacttgatgttctctccaac
gtgtttggggatgagattcttccaactttgatgcctattattcatgctaagttggccact
agtggtgatgcagcctggaaagacagggaagcagctgttttggctcttggtgccgtggca
gaaggttgcattaatggcctttaccctcatttatctgagattgtggcatttcttatccct
ctattagatgacaagtttcctttaattcggagtatttcttgttggacgctttctcgattc
agcaaatttgttgttcaggaagttggccatcagaatggtaatgagcaatttgacaaggtt
cttatgggtcttctacaaagaatattggataccaacaaacgggtgcaagaggctgcttgt
tcagcttttgcaacacttgaagaggaggctgcagaagagttggcaccgcgtttggaagtt
atcttgcagcaccttatgtgtgcttttggaaaatatcagagacggaacctcagaattgta
tatgatgcaattggaaccctagctgatgctgttggacaagaactaaatcagcccacttat
cttgaaattctgatgccaccattaatcacaaagtggcagcaacttccaaattcagacaga
gatctttttccattgcttgagtgctttacatccatagcacaggcattgggtagcggattc
actcagtttgctcttcctgtatttcagaggtgcatagatatcatccagacccaacaactg
gcaaaggtcaatcctgtttcagctggagttcaatatgataaagagtttattgtatgcgct
cttgatctgctctctggacttgtggagggtctcggtagtgggatagagagcttggttgca
caaagtaatttgcgtgaattgcttcttcaatgttgcatggatgatgctcatgatgtcaaa
caaagtgcctttgcccttgttggagacctcgcaaaagtttgccctattcatttgcaccct
cgattatctgaatttcttgatgttgctgccaaacaactgaacacttctaagctgagagaa
actatttcagtagcaaataatgcatgttgggctatcggagaattagctattaaggttcgt
caggaagtctctcctgttgttatgacagttatttcaagcctggtcctaattcttcaacat
tctgaggagcttaataagtcactgatagaaaatagtgcaatcacacttgggaggcttgct
tgggtttgtccagaaatggtggcacctcatatggaacatttcatgcaatcatggtgcatt
gcgttgtctatgatacgtgatgacattgagaaggaggatgcattccgaggtctatgtgca
atggttaaagcaaatccctcgggggctctaagttcacttgttttcatgtgcagagctatt
gcaagttggcatgaaataaggagcgaagagctgcataatgatgtttgccaggtgttgctt
ggttataaacagatgctcaggaatggtgcatgggatcagtgtatgtctgctttggagccc
cctgtaaaagataagctgtcaaaatatcaagtatga
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