Macadamia integrifolia (macadamia nut): 122074636
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Entry
122074636 CDS
T07436
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03040
Spliceosome
ming04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122074636
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122074636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ming03041
]
122074636
04121 Ubiquitin system [BR:
ming04121
]
122074636
03400 DNA repair and recombination proteins [BR:
ming03400
]
122074636
Enzymes [BR:
ming01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122074636
Spliceosome [BR:
ming03041
]
Complex B
Other components
Prp19 complex
122074636
Complex C
Prp19-CDC5 complex
122074636
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
U-box type E3
122074636
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
122074636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
WD40_like
Beta-prop_VPS8
Beta-prop_ACSF4
KNTC1_N
zf-Nse
PAS_11
U-box
V_ATPase_I_N
Motif
Other DBs
NCBI-GeneID:
122074636
NCBI-ProteinID:
XP_042495485
LinkDB
All DBs
Position
3:complement(35659739..35675195)
Genome browser
AA seq
523 aa
AA seq
DB search
MFCSISGVVPEEPAVSRKSGLLYEKRLIERHIADYGKCPVTGDPLTMDDIVLLKTSEIVK
PRSSQAASIPGLLGIFQNEWDGLMLSTFALEQQLHMARQELSHALYQHDAACRVIARLKK
ERDEARSLLSLAERQIPISASAPVTANASALSNGKRAAEDEELGPGGKRIRPGISSGIIG
ELTDCNSALSQERKKRQIPPTLAPIDALEGYTQLSSHPLHKTSKPGILSIDIHPSKDVIA
TGGVDTNAVIFDHASGQILSTLSGHSKKVTSVKFVPRDELFITGSADKTVRLWQGSEDGN
YNCQHILKDHSAEVQAVTVHATNSYFVTASLDNTWCFYDLSSGLCLTQVGDVSGSEGYTS
AAFHPDGLILGTGTAESLVRIWDVKSQSNVAKFDGHIGPVTAMSFSENGYFLATSAHDGV
KLWDLRKLRNFRTFTPYDSNTPTNAVEFDHSGCYLGIAGSDIRVYQVASVKAEWNCVKTF
PDLSGTGKATCVKFGSDAKYMAVGSMDRNLRIFGLPGDGPEES
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgttctgttcaatctccggcgtagtgccggaagagccggcggtttccaggaaatccgga
ctactctatgaaaagaggttgattgagagacatatagcggactatgggaaatgtcctgtg
actggagatccgctcactatggatgacattgttttattgaaaaccagtgagatagtgaag
cccaggtcttcacaggcagctagtatcccaggacttctaggaattttccaaaatgagtgg
gatggcttgatgttatctacttttgcgttggagcagcagcttcatatggcaaggcaagaa
ctgagtcatgctctgtaccagcatgatgctgcttgccgtgtcatagcaagactgaagaaa
gaaagggatgaggcaagatcgttgttgtctttggcagaaagacagattccgatttcagca
tctgctcctgtgacagcaaatgcttcggctcttagcaatgggaaaagagcggctgaggat
gaggagcttggccctgggggaaagagaattcgtcctggtatttcatctggtatcattggt
gagctgactgactgcaacagtgcactctcacaagagcggaaaaagcggcagattcctcca
acgctggcacccattgatgcactggaggggtacactcagctctccagtcatcccctccac
aaaactagcaagccgggcatactatctattgatattcatccctctaaggacgtgattgct
actggtggtgttgacaccaatgctgttatatttgaccatgcatctggtcagatcttgtct
acacttagtgggcattctaagaaggttaccagtgtcaagtttgtacctcgggatgaacta
tttattactggttcagctgataaaacagtacggctatggcaaggatccgaagatggaaac
tacaattgccagcacatcttgaaggatcatagtgctgaggtgcaagctgtcacagtccat
gccaccaacagttactttgtgactgcttctctcgacaatacatggtgcttttatgatctt
tcttctggattatgcctcactcaggttggagatgtttcagggtcagagggctatacctca
gctgcttttcatcctgatggtctcatccttgggactggaactgcagagtcacttgtgcga
atttgggatgtaaaaagtcagtcaaatgttgcaaagtttgatgggcatattgggccagta
acggccatgtctttctctgaaaatggctacttcttggcgacatcagctcatgatggtgtt
aagctttgggatctccgtaaattgagaaatttccggaccttcactccttatgattcaaat
acaccaacaaatgctgtagaatttgaccatagtggatgttacctcggaattgctggttca
gatattagagtttaccaagttgctagtgtcaaggcagaatggaattgcgtcaaaacattc
ccagatttgtctggcacaggtaaagcaacttgtgtgaagttcggttcagatgcaaaatat
atggctgtaggatcaatggacaggaacctgcgaatctttggcttgcctggggatggtccg
gaagagtcttag
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integrated database retrieval system
