Macadamia integrifolia (macadamia nut): 122088553
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Entry
122088553 CDS
T07436
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03420
Nucleotide excision repair
ming04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122088553
09124 Replication and repair
03420 Nucleotide excision repair
122088553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ming04121
]
122088553
03400 DNA repair and recombination proteins [BR:
ming03400
]
122088553
Ubiquitin system [BR:
ming04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
122088553
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122088553
TCR (transcription coupled repair) factors
Cul4-CSA complex
122088553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
122088553
NCBI-ProteinID:
XP_042513788
LinkDB
All DBs
Position
9:complement(21012685..21046012)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPLGLQPMLDVPIYG
RIATLELFRPHGEVQDFLFIATERYKFCVLQWDTDTSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPMPLGGVIIIGEETIVYC
SASAFKAIPTRPSITRAYGRVDADGSRYLLSDHAGLLHLLVITHERERVTGLKIELLGET
SIASTISYLDNAFVYVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPYDTFLVVS
FISETRILAMNADDELEETEIEGFYSQAQTLFCHDAVHNQLVQVTANSVRLVSSTSRELL
HEWTAPSGFSVNVATANATQVLLATGGGHLVYLEIGDGILTQVKYTQLEYEISCLDINPI
GENTNHSQLAAVGMWTDISVRIYSLPGLDLVTKEHLGGEIIPRSVLLCSFEGVSYLLCAL
GDGHLFNFLLNMNTGELTDRKKVSLGTQPITLRTFSSKSTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQTRTFAICSVRYSQSSSEESEMHCVRLLDDQTFEFISMYPLDTYEYGCSILSCSFADD
SNVYYCVGTAYVIPEENEPSKGRILVFVVEDGKLQLIAEKETKGAVYSLNSFNGKLLAAI
NQKIQLYKWMLRDDGSRELQSECGHHGHILALFVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGTTDEERGRLEVVGEFHL
GEFVNHFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHDQYVFLEKLQLNLVKV
IKGVGGLSHEQWRSFNNEKRTADAKNFLDGDLIESFLDLSRGRMEEISKSMAVSVEELCK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctggaattacgtagtcacggctcacaagcccaccaatgtaacccattcgtgt
gtggggaatttcacaagtccgcaggagctcaacctcattatagcgaaatgcacgcgtatt
gagattcatttgcttactccactgggtttacagccaatgttggatgtgccaatatatgga
agaattgcgacacttgagctttttcgaccgcatggtgaagtgcaggatttcctatttata
gctacagagagatacaaattctgtgttcttcaatgggatacagacacatctgagctcata
acaagagcaatgggtgatgtttcagatcgcataggtcgcccaacagacaatggccagatt
ggcataattgatcctgattgtagattaatcggtctccatctttatgatggcttgttcaag
gttataccgtttgataataaaggacagcttaaggaagcatttaatattaggcttgaagag
cttcaagttttggatatcaagttcctctatggttgttcaaaacctacaattgttgttctg
tatcaggataacaaagatgcaaggcacgttaaaacatatgaggttgcactcaaggataaa
gattttgttgagggcccatggtcacagaataatctggacaatggagctggtcttctaata
cctgttccaatgcctctgggtggtgttattattattggagaagaaactattgtgtactgt
agtgcctctgcattcaaagcaataccaactagaccgtcaatcacaagggcctatgggagg
gttgatgctgatggttcacgatacttgcttagtgatcatgcaggattgcttcacttactt
gtgatcacccatgagagagaaagggttactggacttaagatcgagctcttgggagagact
tcaattgcatcgacgatatcgtatcttgataatgcatttgtctatgttggttcgagctat
ggagattctcagctcataaagctaaatctccaacctgatgcaaaaggttcatatgtagaa
gtgttagaaagatatgtgaatttggggcctattgtggacttttgtgtggttgaccttgag
aggcaaggccaaggtcaggtggtaacttgctcaggagcttataaagatggttctcttcgc
attgttagaaatggcataggaattaatgaacaggcatcagtagagcttcaaggtatcaaa
ggaatgtggtctttaagatcatctaccgatgatccttatgacaccttcttggttgtaagc
tttattagtgagactcgaattttggcaatgaatgctgatgacgagttagaagaaactgag
atagaaggattctattctcaagcacagactttgttctgccatgatgctgtacacaatcag
cttgtacaagtaactgcaaactctgtacggctggtcagttctacatctcgagagttactt
catgaatggacagccccttcaggattttcagtgaacgttgctacagctaatgctactcag
gttttgttggcaactgggggtggccatctagtttatcttgaaattggtgatgggatattg
acacaagtaaaatatacacagttggaatatgagatatcatgcctcgacataaatcccatt
ggtgaaaacactaaccatagtcagttagctgcagttggaatgtggacggatataagtgtg
aggatatattctcttcctggcctggatcttgtcacaaaggaacatttgggaggggagata
attcctcgttctgttcttttgtgttcctttgaaggggtatcttacttgttatgtgccctt
ggagatggacatctcttcaattttttgttgaacatgaatactggtgaattgacggatagg
aaaaaggtttctcttggtacacagcctataacgcttcgcaccttctcctccaagagtaca
acccatgtattcgctgcatcagataggccgactgtcatctacagcagtaacaaaaagtta
ctctacagcaatgtgaatttgaaagaagtcagccacatgtgccctttcaactctgctgct
tttccagacagccttgcaatcgcaaaagaaggtgaacttacaattggaactattgacgat
atccagaagcttcacatccgttcaattccactaggagagcatgcacgccgtatctgtcat
caggagcagactcggacctttgcaatctgtagtgtgaggtatagccagtcgagttcagaa
gaatctgaaatgcattgtgtccgcttgttagacgatcaaaccttcgagttcatttcgatg
tatccacttgatacatatgaatatggttgctccatcctcagctgttcctttgcagatgat
agcaatgtgtattactgtgtaggaactgcctatgtaattcctgaagaaaatgagccctcc
aagggacggatactggtcttcgtagttgaagatgggaagttgcagttaattgcggaaaag
gaaaccaaaggtgcagtttactctctgaattccttcaatgggaaacttcttgcagccatc
aatcaaaagattcagttgtacaagtggatgctacgagatgatggttcacgtgagttgcag
tcagaatgtggacaccatggtcatatacttgccctctttgttcagacccgtggggatttc
attgttgttggtgatctaatgaaatcaatctctttgctaatatataagcacgaggagggc
gcaattgaggaacgggcacgtgactacaacgctaactggatgtcagccgttgagattctt
gatgatgacatttatcttggtgcagaaaataacttcaacctattcactgtcagaaaaaat
agtgaaggtaccaccgatgaggagcggggccgacttgaggtggttggggagttccacctt
ggtgagtttgtcaatcatttcaggcatggttcccttgtcatgcgccttccagattccgat
gtggggcagattccgacagtcatatttggtactattaatggtgtgattggggtcattgcg
tcacttccccatgaccagtatgtctttttggagaagctccagttgaacctagtgaaggtc
ataaagggtgtgggaggactgagtcatgaacagtggagatcattcaacaatgagaaaagg
acggcagatgcaaaaaatttcctggatggtgatctaattgagtcattcctcgatctcagt
aggggtcggatggaggagatctcaaaatcaatggctgtttcagtggaagagctctgcaag
agagtggaggagttgacaaggttgcattga
DBGET
integrated database retrieval system
