Macadamia integrifolia (macadamia nut): 122091400
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Entry
122091400 CDS
T07436
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
ming
Macadamia integrifolia (macadamia nut)
Pathway
ming03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ming00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122091400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ming03400
]
122091400
DNA repair and recombination proteins [BR:
ming03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122091400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122091400
NCBI-ProteinID:
XP_042517254
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Position
10:27087226..27103676
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AA seq
926 aa
AA seq
DB search
MEGTTVNSAAIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEIVLKDYGEE
SFKVIDNGCGISPSNFKVLALKHHTSKINDFPDLQSLTTFGFRGEALSSLCALGNLTVET
RTKNEPVATHLTFDRSGLLISERKTARQIGTTVTVDKLFSTLPVRSKEFSRNIRKEYGKL
ISLLNAYALIAGGVRLVCTNTTGKNTKSAVLKTQGNSSIRDNIITVFGMKTFSCLEPLSI
QISESCMIEGFLSKPGHGSGRNLGDRQYFFVNGRPVDMPKVSKLLNELYKSSNSKQYPIA
VMNFTVPTRAYDVNVTPDKRKIFFSDEGSLMHSLREAVEKIYSSSNCSYSINRFEEPEKE
VGNYELNPSHVESNTSLQEIPPEGYSCKDVAFCEREIMEEETTENDIPIKVVKKDIQVSY
KRSGMVHIKDQSPIEKDFSLRVHAVEKADSSGNSNMPLSTKPHSTVDKHVPSPSRAVGKD
SVGNLCSSSHSSIIQSSLMKFVTVNKRKHEDNSTELSEVPVLRNEPSRCQVRKSHSEMHA
SSSRSHGSPPKINDSNGAIENEPSEYHKKSIVCDEVPTPVSSRDGVYMLGSGREDLKDQE
KVLPLDVAANVLPGDGLESILEDLPDTVSVLQSSHLVLDTPVGSSGLEICSTLHFSVEDL
KTRRKQQSRMKSSGLAEERLRVKSSRCYAAATLEHSQPESDERKARALSAATTELERFFN
KKDFSRMKVIGQFNLGFIIGRIDEDLFIVDQHAADEKYNFERLSQSTILNQQPLLQPMRL
ELSPEEEVVASMHMDIIRKNGFTLEEDVHAPPGCQFKLKAVPFSKNITFGAEDFKELIST
LADSQGECSMISSYKMDTSDSVCPSRVRAMLASRACRSSVMIGDPLGRNEMKKILEHLAD
LKSPWNCPHGRPTMRHLIDLTTVRKR
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggagggaacgacagttaattctgcagccattaagcctataaataagagtgtagttcat
aggatctgttcaggacaagtaattctagatctctcatcggcagtcaaggagttggttgag
aacagcttggatgccggtgctactagtattgagattgttttgaaagattacggtgaagaa
tcattcaaggttatcgataatggctgtggcatttcacccagtaattttaaggtacttgca
ctcaagcatcatacctctaaaattaatgattttcctgatctccagtcattgacgactttt
ggtttcagaggggaggcactcagctctctttgtgcattagggaatttaactgttgagacg
agaacgaaaaatgaaccagtggccacacacttgacctttgaccgttcaggcctattaata
tctgaaaggaaaacagcacgccaaattggtaccactgtgacagttgataaattattttcc
actttgccagttcggagcaaggaatttagtcgcaatatccgtaaagaatatggaaagctt
atttcgttattgaatgcatatgctctcattgcaggaggagttcgattagtctgcaccaac
acaactggaaagaacacaaaatcagcagtgcttaaaactcaagggaacagttctattaga
gataacatcattacagtatttggcatgaaaacgttctcatgtttagagcctttgagtata
caaatatcagagagctgcatgattgagggttttctttctaagcctggccatggcagtgga
cgcaacttgggagataggcagtactttttcgtcaatggcagaccagtggatatgcctaaa
gtcagcaagcttttgaatgaattatataaaagttcaaactctaagcaatatcccattgct
gttatgaactttactgtcccaactagagcatacgatgttaacgtaactcctgataaaaga
aagatattcttttctgatgagggatctctaatgcattctttaagagaggctgtagaaaag
atatattcttcaagtaactgcagttattctattaacagatttgaggagcctgagaaggaa
gtgggaaactatgagttgaatccttctcatgtggagtcaaatacgtcactgcaagaaata
cctccagaaggctacagttgtaaggatgtagcattttgtgagagagaaattatggaagaa
gaaactacggagaatgatatccccataaaagttgtaaaaaaggatattcaagtgtcatat
aaaagatcaggaatggtccacatcaaggatcaaagtcccatagagaaagacttctctctt
agagtgcatgctgttgaaaaggccgatagttctggcaatagcaatatgccattgagcact
aaacctcattctactgttgataagcatgttccatctccttcaagagcagtggggaaagat
tctgttggaaatttatgttcatctagtcactcaagcattattcaatcatcactaatgaag
tttgtaactgtgaataagaggaagcatgaagataatagcacggaattgtctgaagtgcct
gttttaagaaatgaaccaagtcgctgtcaagtaagaaaaagccattccgagatgcatgcc
tcatcttcaagatcccatggtagtccccccaagatcaatgattctaatggggccattgag
aatgagccttctgagtatcataaaaaatctattgtttgtgatgaagtaccaactccagtt
tcttctagagacggtgtttacatgttaggatctggaagggaggatttaaaagatcaagaa
aaagtactacctcttgatgtggctgcaaatgtgttgcctggtgatggccttgaaagtata
ttagaggaccttccagacacagtttcagtgttacagtcttctcatctagtattggatact
ccagtgggttcttctggtttagagatatgttctactttgcattttagtgttgaagaccta
aaaacaaggaggaaacagcagtcgagaatgaaatccagtggtttagcagaggaaagatta
agggttaagagctctaggtgttatgctgcggcaacactggagcattctcaaccagaaagt
gatgagcgaaaagcaagggctctatctgcagcaactacagagttggaaagattcttcaat
aaaaaggattttagtagaatgaaggttattgggcagttcaatcttggttttatcattgga
aggatagatgaagacttatttattgtagatcagcatgctgcagatgagaaatacaatttt
gagcgattgtcacaatcaaccatcttgaaccaacagcctttacttcagccaatgaggttg
gagctatccccggaagaagaagttgtggcttcaatgcatatggatataatcaggaaaaat
ggatttactttggaagaggatgtacatgctcctcctggctgccaatttaaattaaaagct
gtacccttcagtaaaaacataacttttggagctgaagattttaaggagctcatatctacc
cttgccgatagtcaaggggagtgctcgatgattagtagttacaaaatggacacttcagat
tctgtttgcccatcaagagtccgtgctatgctggcgtcgcgtgcttgccgttcatccgtt
atgatcggagatccactgggccgaaatgagatgaaaaagatacttgagcatttggcggac
ctcaagtctccttggaattgcccacatggcaggccaaccatgcggcacttgatagacctg
acaaccgtacgcaagaggtaa
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