Minwuia sp. contig_746: ACMVY4_00675
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Entry
ACMVY4_00675 CDS
T11151
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
minw Minwuia sp. contig_746
Pathway
minw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
minw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACMVY4_00675 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minw03021
]
ACMVY4_00675 (rpoB)
03400 DNA repair and recombination proteins [BR:
minw03400
]
ACMVY4_00675 (rpoB)
Enzymes [BR:
minw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACMVY4_00675 (rpoB)
Transcription machinery [BR:
minw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACMVY4_00675 (rpoB)
DNA repair and recombination proteins [BR:
minw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACMVY4_00675 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XOY52652
LinkDB
All DBs
Position
complement(117598..121695)
Genome browser
AA seq
1365 aa
AA seq
DB search
MPLSFTARKRVRHTFGRIAEVVPMPNLIEVQRASYETFLLADTPAEQRGDNGLEGVFKSV
FPISDFSETSSLEFVRYEFEEPKYDVDECMQRGLTFAAPLKVTLRLIVFEVDEDTGAKSV
LDIKEQDVYMGDMPLMTDKGTFIINGTERVIVSQMHRSPGVFFDHDRGKTHSSGKLLYAA
RVIPYRGSWLDFEFDHKDIVHVRIDRRRKLPATTLLYALGMSSDEILANFYNTVTYKHDK
KGWRAPFDPMRYRGQRLLDDIVNADTGEVVAKAGDKLTPRAGKKLVEDGMTDMLIPQEDL
LGRFIAHDIINEKTGEVFAEGGDAIDEAMLEVLLNNKIKDLPTLDIDNVSHGAHIRNTLA
VDKNYSRDTALVDIYRVMRPGEPPTEETAEALFEGLFFDSERYDLSAVGRVKLNARLDLE
AEDTVRVLRKEDILAVVTYMVGLKDGRGEIDDIDHLGNRRVRSVGELMENQYRIGLLRME
RAIRERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPVETPEGPNIGLINSLASFARINQYGFIESPYR
KVQEGKVTGEAVYLSAMEEGRYTIAQANAPFDPESGAFQEEFIASRYQGEFMLARPQDVD
MIDVSPKQLVSVAAALVPFLENDDANRALMGANMQRQAVPLLQPEAPYVGTGMEAVVARD
SGVTLSARRDGVVEQVDAERIVVRATEVTDLSRSGVDIYKMMKFQRSNQSTCITQRPLVK
VGDVVKAGDIIADGPSTDLGELALGRNVLVAFMPWMGYNFEDSILISERIVKDDVFTSIH
IEEFEVMARDTKLGPEEITRDIPNVSEESLRNLDEAGIVYIGAEVEAGDILVGKITPKGE
SPMTPEEKLLRAIFGEKAADVRDTSLKMPPGSTGTVVEVRVFNRHGVEKDERAMQIERDE
IEQFRQDMEDERSIYERNIYASLKNLLLGKEAESGPRGFRTGVAITEEALAELSHGQWWQ
IVLSDGESVANIEALRRQFDEAIGALQARFNNKVDKLQRGDEMPPGVMKMVKVFVAIKRK
LQPGDKMAGRHGNKGVISRIVPEEDMPFLDDGTPVDVVLNPLGVPSRMNVGQILETHLGW
AARGVGLRIGAALEAAKSNGMDMSGLKNEFARVYNEQEMSDIELLGDHELVELGENLSRG
VPMATPVFDGAREPDIVEMLERAGLEKSGQVTLFDGRSGEKFDREVTVGYIYMLKLHHLV
DDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVA
GRNKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELKESDG
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgccgctttctttcactgcccgcaagcgcgttcgtcatacttttggccgcattgccgaa
gttgtccccatgccgaacctgatcgaggttcagcgcgcctcctacgaaacctttctgctg
gcggacacgccggccgagcagcggggcgacaacggcctggaaggcgtcttcaagtccgtc
ttcccgatctcggacttctccgagacctccagcctggaattcgtccgctacgagttcgag
gagccgaaatacgacgtcgacgagtgcatgcagcgcggcctgacctttgcggcgccgctg
aaggtgacgctccgcctgatcgtcttcgaggtggatgaggacacgggcgccaagtccgtt
ctcgatatcaaggagcaggacgtctacatgggcgacatgcccctgatgacggacaagggc
accttcatcatcaacggcaccgagcgcgtcatcgtttcccagatgcaccgttcgcccggc
gtgttcttcgaccatgaccgcggcaagacccattcctcgggcaagctgctctacgccgcc
cgcgtgatcccctaccgtggctcgtggctcgatttcgagttcgaccacaaggacatcgtc
cacgtccgcatcgaccgccgccgcaagctgccggcgaccacgctgctctatgcgctcggc
atgtcctcggacgagatcctggcgaatttctacaacacggtgacctacaagcacgacaag
aagggctggcgggcgccgttcgatccgatgcgctatcgcggccagcgtctgctggacgac
atcgtcaacgctgataccggcgaggtcgtggccaaggccggcgacaagctgaccccgcgc
gccggcaagaagctggtcgaggacggcatgaccgacatgctgatcccgcaggaagatctg
ctcggccgcttcatcgcgcacgacatcatcaacgagaagaccggcgaggtcttcgccgag
ggcggcgacgccatcgacgaagcgatgctggaggtcctgctcaacaacaagatcaaggac
ctgccgacgctggacatcgacaacgtctcccacggcgcgcacatccgcaacacgctggcg
gtcgacaagaactacagccgcgacaccgcgctggtcgatatctaccgcgtgatgcgtccg
ggcgagccgccgaccgaggagaccgccgaggcgctgttcgagggcctgttcttcgattcc
gagcgctacgacctgtcggctgtcggccgcgtgaagttgaacgcgcgcctggaccttgag
gccgaggacaccgtccgcgtgctccgcaaggaagatatcctggccgtcgtgacctacatg
gtcggcctgaaggacggtcggggcgagatcgacgacatcgaccatctcggcaaccgccgc
gtccgctccgtcggcgaattgatggagaaccagtaccgcatcggcctgctgcgcatggag
cgtgcgatccgcgagcgcatgagctcggtcgagatcgatactgtcatgccgcaggacctg
atcaacgccaagccggccgctgctgcggtgcgcgagtttttcggctcgtcgcagctcagc
cagttcatggaccagaccaacccgctgtcggaagtgacccacaagcgccgcctgtcggcg
cttggtccgggtggtctgacccgcgaacgtgcgggcttcgaggtgcgcgacgtgcacccg
acccattacggccgcatctgcccggtggagacgccggaaggtccgaatatcggtctgatc
aactcgctggccagctttgcccgcatcaaccagtacggcttcatcgaaagcccgtaccgc
aaggtgcaggaaggcaaggtcaccggtgaggcggtctatctctccgccatggaagagggc
cgttacaccatcgcccaggcgaacgccccgttcgatccggaatccggcgccttccaggaa
gagttcatcgccagccgctaccagggcgagttcatgctggcccggccgcaggacgtcgac
atgatcgacgtctcgccgaagcagctggtttcggtcgccgcggcgctcgtgccgttcctg
gagaacgacgacgccaaccgcgcgctgatgggcgcgaacatgcagcgtcaggccgtgccg
ctcctgcagccggaagcgccctatgtcggcaccggcatggaggccgtcgtggcccgcgat
tccggcgtcaccctgtctgccaggcgtgacggcgttgtcgagcaggtggatgcggagcgt
atcgtggtccgcgccaccgaggtcaccgacctcagccgttcgggcgtcgacatctacaag
atgatgaagttccagcgctccaaccagtcgacctgcatcacccagcgtccgctggttaag
gtgggcgacgtggtgaaggccggcgacatcatcgccgacggaccgtcgaccgatctcggc
gaactggcgctgggccgcaacgtgctcgtcgccttcatgccgtggatgggctacaacttc
gaggactccatcctgatctccgagcgcatcgtgaaggacgatgtgttcacctcgatccat
atcgaggagttcgaggtcatggcccgcgacaccaagctgggcccggaggagatcacccgg
gacattccgaacgtctccgaggaatcgctgcgcaatctcgacgaggccggcatcgtctat
atcggcgccgaggtcgaggcaggcgacatcctggtcggcaagatcacgccgaagggcgag
agcccgatgacgccggaagagaagctgctgcgcgccatcttcggcgagaaggcggccgac
gtgcgcgacacctcgctgaagatgcctccgggctcgaccggcacggtcgtcgaggtgcgg
gtcttcaaccgccacggcgtcgagaaggacgagcgcgcgatgcagatcgagcgcgacgag
atcgagcagttccgccaggacatggaagacgagcggtcgatctacgagcgcaacatctac
gccagcctgaagaacctgctgctcggcaaggaagccgagagcggcccgcgtggcttccgc
accggcgtcgcgatcaccgaggaggcgctggccgaactgagccacggccagtggtggcag
atcgtgctgtccgacggtgaatcggtggccaatatcgaggcgctgcgtcgccagttcgac
gaggccatcggcgccctgcaggcccgcttcaacaacaaggtcgacaagctgcagcgcggc
gacgagatgcccccgggcgtcatgaagatggtcaaggtcttcgtggccatcaagcgcaag
ctccagcccggcgacaagatggccggccgtcacggcaacaagggcgtcatcagccgcatc
gtgccggaagaggacatgcccttcctggacgacggtaccccggtcgacgtcgtgctcaac
ccgctcggcgtgccgagccgcatgaatgtcggtcagatcctggagacccatctgggctgg
gcggcgcgcggcgtcggcctgcgtatcggcgcagcgctggaggcggcgaagtcgaacggc
atggacatgtccggcctgaagaacgagttcgcccgcgtctacaacgagcaggagatgtcc
gacatcgaactgctcggcgaccacgaactggtcgagctgggcgagaacctcagccgcggc
gtgccgatggcgacgccggtcttcgacggcgcgcgcgaaccggatatcgtcgagatgctg
gagcgtgcggggctggagaagagcggacaggtcaccctgttcgacggccgttcgggcgag
aaattcgaccgtgaagtcaccgtcggctatatctatatgctcaaactgcaccaccttgtg
gacgacaagatccacgcgcgctcgatcggcccgtacagcctggtcacccagcagccgctg
ggcggcaaggcccagttcggcggtcagcggttcggcgagatggaggtctgggccctggaa
gcctacggtgcggcgtacacgctgcaggagatgctgacggtgaagtcggacgacgtcgca
ggccgaaacaaggtctacgaggcgattgtccgcggcgacgacacgttcgaagccggcatc
cccgaaagcttcaacgtcctggtcaaggaaatgcgctcgctcggcctgaacgtcgaactc
aaggaatccgatggctga
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