Micromonas commoda: MICPUN_56144
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Entry
MICPUN_56144 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
mis
Micromonas commoda
Pathway
mis03013
Nucleocytoplasmic transport
mis03015
mRNA surveillance pathway
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_56144
09122 Translation
03013 Nucleocytoplasmic transport
MICPUN_56144
03015 mRNA surveillance pathway
MICPUN_56144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_56144
03041 Spliceosome [BR:
mis03041
]
MICPUN_56144
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
MICPUN_56144
Spliceosome [BR:
mis03041
]
Common components
Common spliceosomal components
Cap binding complex
MICPUN_56144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
8241261
NCBI-ProteinID:
XP_002499583
JGI:
MicpuN3_56144
UniProt:
C1E0M0
LinkDB
All DBs
Position
2:join(832546..833501,833688..835353)
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AA seq
873 aa
AA seq
DB search
MAGSRELEEMREAIIHCDGSPEMMKHLSGLLAQDLPALNEPACKFVLECVQNLPVKTPVY
ATLVAMLNHGCGEFVEEVVRATCELLETSLASATLDDRIRARLLLRFVAVWPVVGIVSES
AAVDILDAVVCAALDAAEKGEPGWQPRADYLAYIALAALPWAGGTLQKAKEFDRMMDSIE
DYLRKRRQGPDPAAMLFAPPAGSAADTVDDWLEECWGRVNEVRKAGAQDEASWTVKSIPP
VTDVVTGDEFEYAGHKHTPPPLKVVEMTFSGAAEALAAYPVRPRLRCGNNRSPLNSPVFL
FFFFFVFLRKPKRLVSSSRILPQEQTEGLWDAGDWGPLERFVAEEYIADTLWAFEPGFRR
DATIPAADQMGTLPLPADHPERCQFLVAETLFGEMLALPRPAHEAVFYHIVIQDLCQAIP
SFPKMMAKVVGQMFRQIGRMEFEARERLADWMAHHLSCFELAWPWQSWVHVADQASAHPQ
RTFCSSVVRRLCRLSYYDRVKESLPDELHCIMPNTPALNPDYILETLNGSSGALRDLQAF
MKEKKPAAEVMEWLKTSGKLDALGRAGAAKVLTVAALQHGQKCITHHNVLLKRYEGALTE
LTQESSEEQGCADVMVAAAAGIWAGTHPHMAVTAVSRLLELGLVKPADVARWLETSISDE
TAAGTDEDGASRGVAWGTADAWDIACLAVETVAADRVNREWKASAARRKVEAAEAQAARA
TADADRAASQGRHVDAGRAKEAAGRIEGKIARLRAELDDASLPVEHAGAQLADAAGALCL
ALVKALAPKLADAAADAAGPTPAEVGADAAPERRDQRALAMCVAALRRFRSYVGAEYEGK
VREALGGASAEVATALGEAMSGRVGFSGAAMIE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagtcgcgagctcgaggagatgcgcgaggccatcatccactgcgacggctcg
cccgagatgatgaagcacctcagcgggcttctggcgcaggatctccccgcgctcaacgag
cccgcgtgcaagttcgtgcttgagtgcgtgcagaacctgccggtcaaaaccccggtgtac
gccactctcgtggcgatgctcaaccacggctgcggcgagttcgtcgaggaggtggtccgc
gccacgtgcgagctgctcgagacgtcgctcgcgtccgcaaccctcgacgacaggatcagg
gctcgccttttgctccgttttgtcgcggtgtggcccgtcgttggcatcgtctccgagtcc
gccgcggtggacatcctcgacgccgtggtctgcgctgcgctcgacgccgcggagaagggc
gagcccggatggcagccgcgcgccgattacctcgcatacatcgccctcgccgcgctccct
tgggcgggtggcacgctccaaaaggccaaggaattcgacaggatgatggactcgatcgag
gactaccttcgcaagcgccgccagggccccgacccggccgcgatgctcttcgcgccgccc
gcgggttccgccgcggataccgtggacgattggctcgaggagtgctggggaagggtcaac
gaggtgcgcaaggcgggagcgcaggatgaggcctcctggaccgtcaagtcgatcccgccg
gtgaccgacgtcgtcaccggagacgagttcgagtatgccgggcataagcacaccccgccg
ccgctcaaggtggtcgagatgacgttcagcggagccgcggaggcgctcgcggcgtacccc
gtgcgtccccgtctcaggtgcggaaacaatcgctcgccgctcaattccccagtcttcctc
ttcttcttcttcttcgtgtttttgcgcaaacccaagcggctggtgtcgtcatcgcggatc
ctgccccaggagcagaccgagggactgtgggacgccggagactggggtcccctcgagcgt
ttcgtcgccgaggagtacatcgcggacacgctctgggcgttcgaaccggggttcaggcgc
gacgcgaccatcccggcggcggaccagatgggcaccctgcccctccccgcggatcacccg
gagcgatgccagttcctcgtcgccgagaccctgttcggggagatgctcgcgctgccgagg
cccgcgcacgaggccgtgttctaccacatcgtgatccaggacctgtgccaggcgatcccg
agcttcccgaagatgatggccaaggttgtcgggcagatgttcaggcagatcggccgcatg
gagtttgaggctagggagagactggccgattggatggcgcaccacctctcctgcttcgag
ctcgcgtggccctggcagagctgggtgcacgtcgcggatcaggcttcggcacatccgcag
cgaacgttctgcagctccgtggtgcgaaggctctgccgtctgagctactacgatcgcgtc
aaggagagcctccccgacgagctccactgcatcatgcccaacacccccgccctcaacccc
gattacatcctggagaccctcaacggcagcagtggcgcgctgagagacctgcaggcgttc
atgaaggagaagaaacccgcggccgaggtcatggagtggctcaagaccagcggcaagctc
gacgccctcggccgcgccggcgccgccaaggtgctcaccgtcgcggctctccaacacggc
caaaagtgcatcacccaccacaacgtgctcctaaagcggtacgagggcgcgctgacggag
ctcacgcaggaatcctcagaggagcagggatgcgcggacgtcatggtggccgccgccgcc
ggtatctgggcgggcacccacccccacatggccgtcaccgccgtgtcccgacttctcgag
ctcgggctggtcaagcccgccgacgtcgcgagatggctcgagacgtccatctccgacgag
accgccgccgggaccgacgaggacggcgcctcgcgcggcgtcgcgtggggcacggcggac
gcctgggacatcgcgtgcctcgccgtcgagacagtcgcggcggatcgagtgaaccgcgag
tggaaagcgtcggctgctcggcgaaaggtggaagccgccgaggctcaggcggcgagggcc
accgccgacgcggaccgcgccgcgtcgcaggggcgacacgtcgacgccggccgcgcgaag
gaggcggcgggtcggatcgagggtaagattgccaggcttcgcgccgagctcgacgacgcg
agccttcccgttgaacacgcgggggcgcagctggcagacgccgcgggcgcgctgtgcctg
gcgctcgtcaaggcgctcgcgccgaagctggcggacgccgcggcggacgccgccggcccg
acgcccgcggaggttggcgcggatgcggcgccggagcgaagggaccagagggctctggcc
atgtgcgtcgcggcgctgcgaaggttccgatcgtacgtcggagccgagtacgagggtaag
gtgagggaggcgctgggcggggcgagcgcggaggttgcgacggcgctcggggaggcgatg
agcgggcgcgtgggtttcagcggcgcggcgatgattgagtag
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