KEGG   Micromonas commoda: MICPUN_79527
Entry
MICPUN_79527      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
mis  Micromonas commoda
Pathway
mis03022  Basal transcription factors
mis03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MICPUN_79527
  09124 Replication and repair
   03420 Nucleotide excision repair
    MICPUN_79527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mis03021]
    MICPUN_79527
   03400 DNA repair and recombination proteins [BR:mis03400]
    MICPUN_79527
Transcription machinery [BR:mis03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     MICPUN_79527
DNA repair and recombination proteins [BR:mis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     MICPUN_79527
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 8241990
NCBI-ProteinID: XP_002500353
JGI: MicpuN3_79527
UniProt: C1E0T4
LinkDB
Position
3:109990..110217
AA seq 75 aa
MVSAVHGSLIETDIPCKVYILHINEQLPPAERFVIQDLDETHLLVQPHRLEYVKAEVKAW
QQKNQFTPPTDLRQT
NT seq 228 nt   +upstreamnt  +downstreamnt
atggtgtccgccgtgcacggctcgctgatagagaccgacatcccctgcaaggtttacatc
ctccacatcaacgagcagctcccgcccgcggaacgtttcgtgatccaggacctcgacgag
acccacctcctcgtgcagccccacaggctcgagtatgtcaaggcggaggtgaaggcgtgg
cagcagaagaaccagttcaccccacccacggatctccgccagacgtga

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