Micromonas commoda: MICPUN_81085
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Entry
MICPUN_81085 CDS
T02695
Name
(RefSeq) SNF2 super family
KO
K15083
DNA repair protein RAD16
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_81085
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
MICPUN_81085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-PARP
zf-RING_2
zf-RING_UBOX
zf-rbx1
ResIII
zf-C3HC4
zf-RING_5
zf-ANAPC11
DEAD
zf-RING_11
zf-Nse
zf-C2HC_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
8243031
NCBI-ProteinID:
XP_002501366
JGI:
MicpuN3_81085
UniProt:
C1E3W2
LinkDB
All DBs
Position
4:join(707313..707440,707543..708611,708876..709026,709279..709949,710025..710891)
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AA seq
961 aa
AA seq
DB search
MPSALTIVEFEGKFEWKLAEYENEQTFSHVVEIAKSGRARCRKCSELIAKDSVRIGVPIK
WRGGLFGWISSWQHPACLRVPGVTRDELRCELHGVDALTDEQADEVLDQLTSDKGVELEE
VDPNDPAFTKREDPVPELPAPAALTRPLLQFQKEGLGWMVANEAGAVRGGILADEMGMGK
TIQTISLLLHAKAERAKAAVEAAKEGKALTAAERPGPTLIVVPTSALVQWEDEIRNCTQP
GSLSVLVYYSDRKTMSKETLEGVDVVLTTYPVVEGEWRKVINRAMVECEYCGKKLLPRSL
VVHQKYFCGPDAVRTAKLAMREKKQNVANEKAMRTLKIKQGKASDVVEAALPTPGNLYRE
LMSKAGRPAMSMYDSAIKARQNPKDPTAVESVDDASDSDATQMKKEEQDDPIVTIGQHTN
DVKGKDTRQGVKPRNVNENINKAPVTSRGHDDVDLSDSLLHTVDWNRIVLDEAHKIKART
TNTAKCIYALKSTTKWCLTGTPLQNRVGELYSLVRFLRMDPHAYYFCKVKGCECKSLCWN
FGPNQKACTQCGHPSPRHFSHFNQHVINPINRYGYVGDGRKGFLTLRKDILLPAQLRRTK
AERAEDVKLPSLTIKVHVCQMDEVERDFYESLYMLTRAKFDGYVKKGSVLHNYAHIFELL
SRLRQACDHPYLVASDNDEAIMVAAVNEPKYWCGMCQEEVDAEDAALSGCKHVFHRECIM
QYASCAPEKGKKVTCPVCRVALTIDLQPSDLSGANKPPRNAAAQHKKDELPSKSILSRID
LSQYTSSVKVDALLKGLNDMRSGKNGHLNKAIVFSQYTSMIEIVDWRLKKDRFTVAKLLG
SMPITQRAANLKAFREDPNVSVILMSLKSGGEGLNLQAANYVFVLEPWWNPAVEMQAIMR
AHRIGQTRGVTAVRFSTKDTIEERMMQLQEKKKLVFEGCMDGNQEALAQLTEEDLQFLFK
R
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgccctcacaatcgtggagtttgagggaaagttcgagtggaagctcgctgag
tacgaaaatgagcagactttcagccacgtggtggagattgcaaagtcgggacgggccaga
tgtcgcaagtgcagcgagttgatcgccaaggatagcgtgcgtatcggtgttccaataaag
tggcgcgggggtttgtttggctggatatccagctggcagcatcccgcctgcctgcgcgtg
ccaggcgtcaccagggacgagctccgctgcgaactgcacggcgttgacgctctcacggac
gagcaggcggatgaagtcctcgaccagctcaccagcgacaaaggagtcgaactggaagag
gtggacccgaacgacccggctttcaccaagcgcgaagaccccgttccagaacttcctgcc
cccgccgcgctaacgagaccgcttctgcagtttcagaaggagggtcttggctggatggtt
gcgaacgaggctggagcagtgcgcggtggaatcctcgcggacgagatgggcatgggcaaa
acgattcagacgatctcgcttctgctacacgctaaggcagagcgcgccaaagctgcggtg
gaggcggcaaaggagggaaaggcgctcaccgccgcagagagaccaggcccgaccctcatc
gtggtgccgacgtcggcgcttgtgcagtgggaggatgaaatccggaactgtacccagccc
ggctcgctgagcgtgctcgtctactacagtgaccgaaagacaatgtcgaaggagacgctg
gagggcgttgacgtggtcctgacaacgtacccggtggtggagggcgagtggcgcaaggtg
atcaatcgtgcaatggtggagtgcgagtactgtggcaagaagcttctaccgaggtccctg
gtggtgcaccagaaatatttctgcgggcccgacgcggtgcgaacggcgaagctggcaatg
cgggagaagaaacagaacgtcgcaaacgagaaagccatgcggacactgaagattaagcaa
ggaaaagcgagtgatgtggttgaggctgcactgccaacacctggtaatctctaccgtgag
ctgatgtcaaaggctgggcgaccggcgatgtccatgtacgacagtgccatcaaggcgcgt
cagaatcccaaagacccgactgccgtcgaaagtgtagatgacgcgtctgactctgatgcc
acacaaatgaagaaagaagagcaggatgatcccattgtcaccattggacagcacacgaat
gatgtgaaaggcaaagatacgcgtcagggtgtcaagccgagaaatgtgaatgagaatatc
aacaaggctcccgtcaccagcagaggtcatgatgacgttgacctctctgactctctgctt
cacactgttgattggaacagaatcgtcctcgacgaggctcacaaaataaaggctcgcacg
accaacaccgcaaagtgcatctatgcgctgaagtccacaacaaagtggtgtctgaccggc
actcctctgcagaaccgtgttggagagctgtactcacttgtcaggtttctacgcatggac
ccgcacgcatattatttctgcaaggtgaaaggttgtgagtgcaagagcctgtgctggaac
tttggaccgaaccaaaaagcgtgtacgcagtgtggacacccgtcaccacgtcatttcagt
cacttcaatcagcacgtcatcaatccaatcaatcgctatggttatgtgggcgatggtcgc
aagggattcctgacccttcggaaggacatcctcttgcctgcgcagcttcgacgcacaaag
gctgaacgcgcggaggacgttaagctgccctcgctcaccatcaaagtacatgtctgccag
atggacgaggttgaaagggatttctatgagtctctctacatgctcactcgtgctaagttt
gacgggtatgtgaagaagggatctgtgcttcacaactatgcccacattttcgaactactc
tccagactccggcaggcgtgtgatcacccttacctcgtagcttcggataatgatgaggcc
ataatggtggcagctgtgaatgaacccaaatattggtgcggcatgtgccaggaggaggtt
gacgcagaagatgctgcactctccggatgcaaacacgtgtttcaccgcgagtgcatcatg
cagtacgcaagctgtgcccccgagaagggtaaaaaggtgacatgtcctgtgtgccgcgtg
gcgctcaccattgacttgcagccaagtgatttgtccggcgcgaataagcccccacgcaac
gcagcagcacagcacaagaaggacgagctgccctccaaatccatcctgtcacgtatcgat
ctatcccagtacaccagcagcgtcaaggtcgacgccttgttgaaaggccttaacgatatg
cgttccgggaaaaatggccatctgaataaggcaatcgtgttcagtcaatacacgtccatg
attgagatcgttgactggcggctgaagaaggatcgcttcaccgtagccaagctgctcggc
agcatgccaatcacccagcgcgcggcgaacctaaaggcattcagggaggatcccaacgtc
tcggtgattctcatgtcactcaagtccggaggtgaaggtctcaacttgcaggcggcaaac
tacgtgtttgtgctagagccgtggtggaaccccgctgtggagatgcaagccatcatgcgc
gcacaccgcattgggcagacgaggggggtcacagcagttcgcttctccaccaaagacacc
atagaggagcgcatgatgcagttgcaggagaagaagaagctggtattcgagggatgcatg
gatggaaaccaggaggcgctggcgcagctcacagaggaggaccttcagttcctattcaag
cgatga
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