Micromonas commoda: MICPUN_88427
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Entry
MICPUN_88427 CDS
T02695
Name
(RefSeq) predicted protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mis
Micromonas commoda
Pathway
mis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUN_88427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_88427
03016 Transfer RNA biogenesis [BR:
mis03016
]
MICPUN_88427
Enzymes [BR:
mis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MICPUN_88427
Messenger RNA biogenesis [BR:
mis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MICPUN_88427
Transfer RNA biogenesis [BR:
mis03016
]
Prokaryotic type
tRNA degradation factors
MICPUN_88427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
Motif
Other DBs
NCBI-GeneID:
8249205
NCBI-ProteinID:
XP_002505868
JGI:
MicpuN3_88427
UniProt:
C1EGG8
LinkDB
All DBs
Position
14:726..3101
Genome browser
AA seq
791 aa
AA seq
DB search
MSAFGRSALRGFAATSDDAKPDGGGCEPTFKGAYCESVAVELGTERTPVRVGFETGRVAR
LTDGAIVASMGDSRVICAAVCSRDENPDAGFFPLQVDYRERHSAFGKIPPTFTRREGAPK
DREVLAMRVVDRAIRPLFPKSFSRDTSVQAIVLATDQSQDPAVLAVNGASAALSVSSIPW
NGPVGAVRVSVLGDGNEIILNPSDKDVEASKLTLFYAGNENRTLMIEAQAGTADEGGVPE
SVVASALRAAHEAAKVLIEPQRRLQRAIGKEKLDPVQQTPEQAKLRHDVFDRSSEKLRAL
YKEEIQCKHTRGKRMAELKDEIVNSMTEEGMSFTNNDVEQAFFWVSSRVMRDMIFEDKKR
VDGRGIRELRQLGAESNVLPVVHGSSIFERGNTQALATVTIGKLIDAQKLDAPVGPDNRR
MMLHYSFPSFSINETPRRGGLSRREIGHGALAEKSLAGIIPAAKEWPFAVRINAETMESN
GSSSMAAVCSGSLALMDAGVPIKEHVGAISVGLVMDEDEQTGKVTRYELLSDIMGLEDVL
GDMDFKIAGTRGGITGIQLDCKPAGIPLDILIEAMDVASIARSAVIDEMDRAISKPRSRD
DSEDGAQFTTVRMDRSLIGRLIGPKGDTIRELERTTGAKVSIHEEDDAGVDDQCTLGIFA
GTRPGLDAALEKIQLIAWVPKEGDVVKAKVVNQLAYGWFLRLPNEQDGLLHASEYLHTRK
VDPMKDNIFQIGEEVLVKIKDVSDGRVGLSVKALSPAPEGTEVGRRGSRAGAGFERNEDG
SLKRPLRRLKD
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctttcgggaggtcagcccttcgcgggttcgccgccacgagcgacgacgcgaaa
cccgatggaggaggttgcgagcccacgttcaagggcgcctactgcgagtccgtcgccgtg
gagctcgggaccgagcgcacgccagtgagagtagggttcgagaccggaagggtggcacga
ctcacagacggcgcgatcgtggcgagcatgggagactcgagggtgatttgcgcggcggtg
tgctcgcgcgatgagaacccggacgcggggttcttccctctgcaagtggattaccgtgaa
agacatagcgcgttcggtaagatcccaccgacgttcacgcggcgcgagggtgctccgaag
gaccgtgaggtgctcgccatgcgcgtcgtggatcgagcgattcgccctctgttccccaag
tccttctccagggacaccagtgtgcaggcaatcgttctggccacggaccagtcgcaggat
ccagccgtgctcgcggtgaacggcgcttccgcagcgctgtctgtgtcgtccataccctgg
aatggtcctgtgggggccgtgcgtgtttccgtgttgggcgacggcaacgagataattctg
aacccctccgacaaggacgtcgaggccagcaagcttacgctgttttacgccggaaacgaa
aatcgcactctgatgatcgaggcgcaagccggcaccgcagacgaaggcggcgttcccgag
tccgtcgtggcgagtgcgctacgagccgcgcacgaggcggcgaaggttttgatcgagccc
caacgcaggctgcagcgcgcgatcggcaaggaaaagctggatccagtgcagcaaacccca
gaacaggcaaagttaagacacgacgtgtttgaccgctcgagcgaaaaacttcgcgctctg
tacaaggaggagattcagtgcaagcacacgcgcgggaagagaatggcggaacttaaggat
gagatcgtaaactcgatgacagaggaagggatgtcgttcaccaacaacgacgtcgaacaa
gctttcttttgggtaagttcacgcgtgatgcgggacatgatctttgaggacaagaagaga
gtggacgggcgcgggattcgcgagctgcgccaactcggtgcggagtcaaacgtattgccg
gtggtacatggatcttccatcttcgagcgtgggaacacccaggcgttggcgactgtgaca
attggcaaattgattgatgcacagaagcttgacgcgcccgtcggtccagataaccgacgc
atgatgctgcactattcgttcccttcgttctccatcaacgagaccccgaggcgcggaggt
ttatcacgacgcgagattggtcacggcgcgctggccgaaaagtctctcgctggtataatc
ccagcggcgaaggaatggccgtttgcggttcgcataaacgcagagacgatggagagcaac
gggagctcctccatggcagcagtttgttccggctctttggcgctgatggacgcgggcgtg
cccatcaaagaacatgtcggtgccatatctgttggtctggttatggatgaggacgagcag
acgggcaaggtgacgcgttatgagctgctgtcggatatcatgggcttggaggatgtgctc
ggggatatggactttaagattgcgggaacgcgcggtgggatcacgggaatccaactcgac
tgcaagcccgcagggatcccactcgacattctgatcgaggctatggacgtcgcgtccatc
gcaagaagcgcggtgatcgacgagatggatcgtgccatttccaagcccaggagcagggac
gactccgaggacggcgcacagtttaccacggttcgcatggaccgcagcctgattggtcgc
ctgataggccccaagggcgatactatccgcgaactggagcgaactacgggcgcaaaggtg
agcatccacgaagaagacgacgctggagttgatgaccagtgcaccctaggtatcttcgcg
ggcaccaggcccgggttggacgcggcgcttgagaagattcagttgattgcttgggtgcca
aaagagggtgatgttgtgaaggccaaggtggtcaatcagctcgcgtatggatggtttttg
aggttgccgaacgagcaggacgggcttttacacgccagcgaatacttgcacacgaggaag
gttgatccgatgaaggacaatatttttcaaatcggtgaagaggtgttggtgaaaataaaa
gacgtgagcgacgggcgggtcggtctcagcgtcaaggcgctctcgccggcgccagaggga
accgaggtcgggcggagaggatcgcgtgcgggtgcgggatttgagaggaacgaggacggg
tcgctcaagcgcccgctgcgccgcctcaaggattga
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