KEGG   Micromonas commoda: MICPUN_88700
Entry
MICPUN_88700      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K12827  splicing factor 3A subunit 3
Organism
mis  Micromonas commoda
Pathway
mis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUN_88700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mis03041]
    MICPUN_88700
Spliceosome [BR:mis03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    MICPUN_88700
 Complex B
    MICPUN_88700
 Complex C
   U2 SnRNP specific factors
    MICPUN_88700
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd PRP9_N
Other DBs
NCBI-GeneID: 8249234
NCBI-ProteinID: XP_002506480
JGI: MicpuN3_88700
UniProt: C1EHT0
LinkDB
Position
15:complement(join(98446..98604,98942..100108,100323..100496))
AA seq 499 aa
MASTLLERTRESHEEIERLERAICADFRNEAVTHKERLAQNHRVRSMLDDMANKSKRLRA
VYEDADGVRKEEIEALGGGSNVFSAFYDRLKETRDYHKQFAGYHAPLSDEFLRQYRDGKP
PEFSGEEASGRYLDLHAHHRAFQNASFGSKDCEYIAYLSVVGDFDPIPREKKFTKAYEEY
LSGLVGYLRGFHARVKPLVFLDTVTRKAEEEFETRWASGSIPGWEDKGLVAVKSNVVDLE
AFDSAVEMETAVGMDKIKEALASMGLKQGGTPTQRRDRLWSTRGKSVGEIDKKLFAKGAV
TGADDADAKKKEERAKGVARAESLAQTLLEHLRQQLEATKGNVEKKATLSLAELEAEAEE
DDDWVEEEAEDEEEEIYNPLKLPMGWDGKPIPYWLYKLHGLNLEFTCEICGNYSYWGRRA
YERHFKEFRHQHGMRCLNIPNTKAFAEVTTIADALALQKALDARKVGQWKRETDEECEDA
DGNVYNKKTYEDLRRQGLI
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggcgtccacgctgctcgagcgcacgcgcgagtcccacgaggagatcgagcggttggag
cgcgcgatatgcgccgacttcaggaacgaggcggtgacgcacaaggagcgcctggcgcag
aatcacagggtccgatcgatgctcgacgacatggcgaacaagtccaagcggctgcgggcc
gtgtacgaggacgccgacggcgtgcgcaaggaggagatcgaagccctcggcggcggctcc
aacgtcttctccgccttctacgatcgcctcaaggagacgcgcgattaccacaagcaattc
gcgggctaccacgccccgctctccgatgagtttctgcgacagtaccgcgacggtaaaccg
ccggagtttagcggcgaagaggcgagcgggcggtacctggacctgcacgcgcaccatcgc
gcgttccagaacgcttcgttcgggtccaaagactgcgagtacatcgcgtacctctccgtc
gtcggcgatttcgaccccatcccgcgagaaaagaaattcacgaaagcgtacgaggagtac
ctctccggtctcgtcgggtacttacggggcttccacgcgcgggtcaagcccctcgtcttc
ctggacaccgtgacgcgcaaggcggaggaggagttcgagacgcgatgggcgtccgggtcg
ataccggggtgggaagacaagggtttggtcgcggtgaagtccaacgtcgtcgacctcgaa
gctttcgactcggcggttgagatggagacggcggtggggatggataagatcaaggaggcg
ctcgcgtccatgggtctgaagcagggcggaaccccgacacagaggcgcgaccggctgtgg
agcacgcggggcaagtccgtaggggagattgacaagaagctcttcgccaagggcgcggtg
acgggcgccgacgacgcggacgcgaagaagaaggaggaacgcgccaagggcgtcgccagg
gcggaaagtctggcgcaaacgcttctggagcatttacggcagcagctggaggcgacgaaa
ggaaacgtcgagaagaaggcgacgctgtccttggcggagctggaggcggaggctgaggag
gacgacgactgggtggaggaggaagcggaggacgaggaggaggagatttacaacccactc
aagctgccgatgggttgggacgggaaaccgatcccgtactggctgtacaagctgcacggc
ctgaacctcgagttcacgtgcgagatctgcggcaactactcctactggggacgacgggcg
tacgagcgccacttcaaggagttcaggcatcagcacgggatgcggtgcctgaacataccc
aacacgaaggctttcgccgaggtgacgacgattgcggatgcgctcgcgctgcaaaaggcg
ctggacgcgcgcaaggttggccagtggaagcgcgagacggacgaggagtgcgaggatgcc
gacggcaacgtgtacaacaagaagacgtacgaagatcttcgccgacaggggctcatctga

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