Micromonas commoda: MICPUN_96388
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Entry
MICPUN_96388 CDS
T02695
Symbol
AMY4
Name
(RefSeq) glycoside hydrolase family 13 protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
mis
Micromonas commoda
Pathway
mis00500
Starch and sucrose metabolism
mis01100
Metabolic pathways
mis01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
MICPUN_96388 (AMY4)
Enzymes [BR:
mis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
MICPUN_96388 (AMY4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
8244379
NCBI-ProteinID:
XP_002502742
JGI:
MicpuN3_96388
UniProt:
C1E7K8
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Position
6:91194..92486
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AA seq
430 aa
AA seq
DB search
MGEGAEIMLQGFNWESCNSGVKWHNVIANEARSIRDAGFTAVWLPPPTKSVSDQGYLPSD
LYNLNSFYGSEGELRGCIRALKDVGVCPVADIVINHRCAEAQSSDGRWNIFTGRMAWDQR
AITTDNPEYGGQGNGGTGEDYGPAPNIDHTQDWVRNDIKEWLHWMKNDIGFGGWRFDFVK
GYAGHFTGEYVGDTMPYVSVGEHWVSCNYNHSHLEYNQDSHRQSTYDWCNSTGGNTAAFD
FTTKGILQEAVRNREYWRLSDSQGNPAGFCGSWPTHAVTFLENHDTGSTLQHWPFPTERL
PEGYAYILTHPGTPTVFYDHWKDHALQEDIQRLIDIRRRVGLKCNAAVQIQKAEDGCYAA
HVGHPAVGVERGACKEIDMSKPSLCMKLGPADWSPNQGRVGDTKWKVMASGDGWAVWENV
RFLSAEQRSR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagggcgcggagatcatgctgcaagggttcaactgggagtcgtgcaacagcggc
gtcaagtggcacaacgtcatcgccaacgaggcgaggagcattcgagacgccgggttcacc
gcggtttggctgccgccccccacaaaatcggtatccgaccagggatacctcccgagcgat
ctctacaacctcaactcgttctacgggagcgagggcgagctccgggggtgcatccgcgcg
ctcaaggacgttggcgtctgccccgtcgcggacatcgtgatcaaccacaggtgcgccgag
gcgcagagctcggacgggcggtggaacatcttcaccgggcgcatggcctgggaccagcgg
gcgatcaccacggataaccccgagtacggcggtcagggcaacggcggcaccggcgaggac
tacggcccggcgcccaacatcgatcacacccaagattgggtgcgcaacgacatcaaggag
tggctgcactggatgaagaacgacatcgggttcggcgggtggaggttcgatttcgtcaag
gggtacgccggtcacttcaccggcgagtacgtgggcgacacgatgccgtacgtctccgtc
ggcgagcactgggtgtcgtgcaactacaaccactcgcacctcgagtataaccaggactcg
cacaggcagtccacctacgactggtgcaacagcaccgggggtaacaccgccgccttcgac
ttcaccaccaaggggatcctccaggaggctgtgcggaaccgagagtactggcgcctcagc
gactcgcaggggaatcccgcgggcttctgcggcagctggcccacgcacgccgtcaccttc
ctcgagaatcacgacaccggctccaccctgcagcactggcccttccccacggagcgcttg
cccgaggggtacgcgtacatcctcacgcaccccggcacccccacggttttttacgatcac
tggaaagatcacgcgctccaggaagacatccagcggctgatcgacatccgccgaagggtc
gggctcaagtgcaacgcggcggtgcagatccagaaggctgaggacggctgctacgcggcg
cacgtgggccatcccgccgtcggcgtcgagcggggggcgtgcaaggagatcgacatgtcc
aagccgagcctgtgcatgaagctcgggcccgcggattggagcccgaaccaggggcgcgtg
ggggataccaagtggaaggtcatggctagcggtgacgggtgggcggtgtgggagaacgtt
cgattcctctccgccgaacaacggtctcgttag
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