Microbacterium sp. XT11: AB663_002822
Help
Entry
AB663_002822 CDS
T04243
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mix
Microbacterium sp. XT11
Pathway
mix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB663_002822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mix03019
]
AB663_002822
03009 Ribosome biogenesis [BR:
mix03009
]
AB663_002822
Enzymes [BR:
mix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AB663_002822
Messenger RNA biogenesis [BR:
mix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB663_002822
Ribosome biogenesis [BR:
mix03009
]
Prokaryotic type
rRNA processing factors
AB663_002822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Rootletin
Motif
Other DBs
NCBI-ProteinID:
ALX67115
LinkDB
All DBs
Position
complement(2910155..2912647)
Genome browser
AA seq
830 aa
AA seq
DB search
MADDNNDYDAPTLDFPADADAPAEVTAGRDDEAAGAPSQEARSSEEPLGDSPADTAGTEP
AEVEAAEADASATEPAEAESTEAEPAEAEPAEAPSTEDERAGVEADADGADAAPAQPVAE
TVTPEAATPESGTPEVSEPEPPAPVTAVSLGLLPEVFVSRVSTQLHFYAPEIVPLPARPG
RDRDVARDQEEPASGRRGRRRRGGSDSDDERSEPRQRQRVVEYITEPKAIKGSTRLEAKK
QRRRDGRDAGRRRPVVTEAEFLARRESVDRKMVVRSKNGRTQIGVLEDGVLVEHYVARNQ
DASLIGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLYSGEVDWDGVETGNQPRRIELALKP
GDRVLVQVTKDPVGHKGARLTSQISLPGRYLVYVPGGSMNGISRKLPDNERARLKRILKE
VLPESSGVIVRTAAEGATEEQLTRDVQRLTTQWEHIQKQVETQQAPALLHAEPDLLVKIV
RDVFNEDFGKMLIQGEDAQRTITAYLESVAPDLLERVEPYTDEVDPFDAFRITEQIEKAL
DRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVGSGGNLEETVTKNNLEAAEEIVRQLRLRD
IGGIIVVDFIDMVLESNRDLVLRRLIECLSRDRTKHQVAEVTSLGLVQMTRKKLGLGLLE
TFSEACEVCAGRGVIVHHDPVIKHRSSSNGNSSSNRRQRGGNGQSQSSQPVAGTTHVIPE
GAKTALAQIAASTIAPPAEGQQEVVTVTVQTESIVPERAKKSRKKRGSERKGPKTPAEQL
LDSVLDALPEPKAPGQGRARRRVTTAALTGTPISVNTETSAPITSGDAQA
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacaacaatgactacgacgcccctaccctcgatttccctgcggatgccgac
gcgcccgcagaggtgacggctggccgagacgacgaggcagccggcgcgccgtcgcaggag
gcgcggtcgagcgaggaaccgctgggcgattcgccggccgacaccgccgggaccgagcct
gctgaggtcgaggctgctgaagctgacgccagtgcgactgagcctgccgaggccgagtcg
accgaggctgagcccgccgaagctgagcccgccgaggccccgtcgaccgaggacgagcgt
gccggggtggaggctgacgcggatggtgcggatgccgcccccgcccagccggtggccgag
acggtgactccggaggcggcgactcccgagtcggggactcccgaggtctccgagcccgag
ccgcccgcaccggtgacggccgtgtcgctggggctgctgcccgaggtcttcgtctcgcgg
gtgtccacccagctgcacttctacgcaccggagatcgtgccgctccccgcacgccccggc
cgcgaccgagacgtcgcccgtgaccaggaggagccggcatccggccgtcgcggtcggcgc
cgccggggcggctccgattccgatgatgagcgctccgagccgcgccagcggcagcgcgtc
gtcgagtacatcaccgagccgaaggccatcaagggctcaacgcgtctcgaggcgaagaag
cagcgccgacgcgacgggcgtgacgccgggcgccgtcgtcccgtcgtgaccgaggccgag
ttcctcgcgcgccgcgagtccgtcgaccgcaagatggtcgtgcgctccaagaacggccgt
acccagatcggcgtgctcgaagacggcgtgctcgtggagcactacgtcgcccgtaaccag
gatgcgtcgctgatcggcaacgtctacctcggtcgcgtgcagaacgtgctgccgagcatg
gaggccgcgttcgtggacatcgggcgcggacgcaacgccgtgctgtactccggcgaggtg
gactgggacggcgtggagaccggcaaccagccccgtcgcatcgagctggcgctcaagccg
ggggaccgtgtgctcgtgcaggtcacgaaggacccggtcggccacaagggcgcgcggctg
acgagccagatctccctccccggccgctacctcgtgtacgttcccggcggatcgatgaac
ggcatcagccggaagctccccgacaacgagcgtgcgcggctcaaacggatcctcaaggag
gtgctgcccgagtcgtccggcgtcatcgtccgcacagcggcggagggggcaaccgaggag
cagctgacgcgtgacgtgcagcggctcacgacccagtgggagcacatccagaagcaggtc
gagacgcagcaggcgcccgcgctcctgcacgccgagccggatctgctggtcaagatcgtc
cgtgacgtcttcaacgaggacttcggcaagatgctcatccagggcgaggatgcgcagcgc
accatcacggcctacctcgagagcgtcgctcccgacctgctcgagcgcgtcgagccgtac
acggacgaggtggaccccttcgacgccttccgcatcaccgaacagatcgagaaggcgctc
gatcgcaaggtctggctgccgtctggcggttcgctcgtcatcgaccgcaccgaggcgatg
accgtggtcgacgtcaacaccggcaagttcgtcggttcgggcggcaatctcgaggagacg
gtcaccaagaacaatctcgaagccgcggaggagatcgtccggcagctgcgtctgcgtgac
atcggcggcatcatcgtcgtcgacttcatcgacatggtgctggaatccaaccgtgacctc
gtgctgcgccggctcatcgagtgcctgagccgcgaccgcacgaagcaccaggtcgccgag
gtcacctcgctcggcctcgtgcagatgacgcgcaagaagctcgggctcggtctgctcgag
acgttcagtgaggcatgcgaggtctgcgcagggcgcggggtgatcgtgcaccacgacccc
gtgatcaagcaccgctcctcgtcgaacgggaactcttcgtcgaaccgtcgccagcgcggc
gggaacgggcagagccagagctctcagccggtggcgggcacgacacacgtcatcccagag
ggtgcgaagacggcactggcgcagatcgccgcctcgaccatcgcaccaccggccgaaggg
cagcaggaggtcgtcacggtcaccgtgcagaccgagtcgatcgtccccgagcgcgcgaag
aagtcccgcaagaagcgggggagcgagcgcaaggggccgaagaccccggccgaacagctg
ctcgactccgttctcgacgcgctgccggagccgaaggcaccgggtcagggccgcgcgcga
cgcagggtgaccacggcggcgctgaccggcacgccgatctccgtgaacacggagacgtca
gcgccgatcacgagcggggatgcgcaggcctga
DBGET
integrated database retrieval system
