Mycobacterium sp. JLS: Mjls_0998
Help
Entry
Mjls_0998 CDS
T00482
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mjl
Mycobacterium sp. JLS
Pathway
mjl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mjl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mjls_0998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjl03021
]
Mjls_0998
03400 DNA repair and recombination proteins [BR:
mjl03400
]
Mjls_0998
Enzymes [BR:
mjl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mjls_0998
Transcription machinery [BR:
mjl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mjls_0998
DNA repair and recombination proteins [BR:
mjl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mjls_0998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ABN96806
UniProt:
A3PV79
LinkDB
All DBs
Position
1083901..1087848
Genome browser
AA seq
1315 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITDVNDEMRHNELSTLEAEMVVEKKAVEDQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELVDRYGEYFTGAMGAESIKKLIENFDIEAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQTNRNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYFLTTMIEGDKGEYR
PAATDQPEEGVYSSPAEAIMAMDRGALSVRAKIKVRLTQLRPPAALEAELFENGWKPGLA
WTAETTLGRVMFNELLPISYPFINEQMHKKVQARIINDLAERFPMIVVAQTVDKLKDAGF
HWATRSGVTVSMADVLVPPQKQEILDRYEAEADGIERKYQRGALNHKERNDSLVKIWQDA
TEEVGKALEEHYPADNPIITIVKSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCETERGINVTL
AERQPDGSLIRDPHVETSAFARTLATDAVDADGNVVIERGHDLGDPAIDKLLAAGIDHVK
VRSVLTCASATGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVG
EDITGGLPRVQELFEARVPRNKAPIADVSGRVQLEEGERFYKITIVPDDGGEEVVYDKLS
KRQRLRVIKHEDGSEGVLSDGDHVEVGDQLMEGSADPHEVLRVQGPREVQIHLVHEVQEV
YRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFESENRRVVAEGGEPA
AGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIPAG
TGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgagctccggatcggcctcgccaccgccgacgacatt
cgtcagtggtcctacggtgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccggagaaggatggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcaccc
gtcacgcacatctggtacttcaagggtgtgccgtcgcggttgggctacctgctcgacctg
gccccgaaggatctcgagaagatcatctacttcgcggcctacgtcatcaccgacgtcaac
gacgagatgcgccacaacgagctctcgaccctcgaggccgagatggtcgtcgagaagaag
gccgtcgaggatcagcgcgacgccgacctggaggcccgcgcccagaagctcgaggccgac
ctggccgagctcgaggccgaaggcgccaagagcgacgtgcgccgcaaggtgcgcgacggc
ggcgagcgggagatgcgtcagctccgcgaccgggcccagcgtgagctggaccggctcgac
gagatctggaccaccttcaccaagctggctcccaagcagctcatcgtcgacgaggtgctc
taccgcgagctcgtcgaccgttacggcgagtacttcaccggtgccatgggcgcggagtcg
atcaagaagctcatcgagaacttcgacatcgaggccgaggccgagaacctgcgcgagacc
atccgcagcggcaagggtcagaagaagctgcgcgcgctcaagcgactgaaggtcgtcgcg
gcgttccagacgaatcgcaactcgcccatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcgcccgatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggttgaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcgcatgctccaggagtcggtggacgcg
ctgttcgacaacggccgtcgcggccggcccgtcaccgggcccggtaaccgtccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgtcagaacctgctcggtaag
cgcgtcgactactcgggccgttcggtcatcgttgtgggtccccagctgaagctgcaccag
tgcggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggaacgtcagcgt
ccgcaggtgtgggacgtgctcgaagaggtcatcgccgagcacccggttctgctgaaccgc
gcacccacgctgcaccgcctcggtatccaggccttcgagccgcagctggtcgagggtaag
gccatccagctgcacccgctggtctgcgaggcgttcaacgccgacttcgacggcgaccag
atggccgtgcaccttccgctgagtgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgcccgcgtcgggtaagccgctggccatgccgcgtctggac
atggtcaccgggctgtacttcctgaccacgatgatcgagggcgacaagggcgagtaccgt
cccgccgccacggatcagccggaggagggcgtgtacagctcgcccgccgaggcgatcatg
gcgatggaccgcggtgcgctgagcgtgcgcgcgaagatcaaggtgcggctgacccagctg
cggccgccggccgccctggaggccgagctgttcgagaacgggtggaagccgggcctggcc
tggaccgccgagacgacgctcggtcgcgtgatgttcaacgagctgctgccgatctcgtat
ccgttcatcaacgagcagatgcacaagaaggtgcaggcccggatcatcaacgatctggcc
gagcgcttcccgatgatcgtcgtcgcacagaccgtcgacaagctcaaggacgccggtttc
cactgggccacccgttcgggtgtcacggtctcgatggccgacgtgctcgtgccgccgcag
aagcaggagatcctcgaccgctacgaggcggaagccgacgggatcgagcgcaagtaccag
cgtggcgccctgaaccacaaggagcgcaacgactcgctggtcaagatctggcaggacgcc
accgaagaggtcggtaaggccctggaggagcactacccggcggacaacccgatcatcacg
atcgtgaagtcgggcgccacgggtaacttcacgcagaccagaacgctggccggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcggccgatcaagtcctcgttccgc
gagggcctgacggtgctggagtacttcatcaacacccacggcgcccgtaagggtctggcg
gacacggcacttcgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtttcg
caggacgtgatcgtccgcgagcacgactgcgagaccgagcgtggcatcaacgtcacgctg
gccgagcgtcagcccgacggcagcctgatccgcgatccgcacgtcgagacctcggcgttc
gcccgcaccctggccaccgacgcggtcgacgccgacggcaacgtcgtcatcgagcgtgga
cacgacctgggcgacccggccatcgacaagctgctggcggccggcatcgaccacgtcaag
gtgcgttcggtgctgacctgtgcgtcggccaccggcgtgtgcgccatgtgctacggccgt
tcgatggcgaccggcaagctggtcgacatcggcgaggccgtcggcatcgtggccgcgcag
tccatcggtgagcccggcacgcagctgaccatgcgcaccttccaccagggcggtgtgggt
gaggacatcaccggcggtctgccccgcgtgcaggagctcttcgaggcccgcgtgccgcgg
aacaaggcgccgatcgccgacgtctccggccgtgtgcagctcgaggagggtgagcgcttc
tacaagatcaccatcgtcccggacgacggtggcgaggaagtggtctacgacaagctctcc
aagcgtcagcgcctgcgtgtgatcaagcacgaggacggctccgagggcgtgctctccgac
ggcgaccacgtcgaggtcggcgaccagctcatggagggttcggccgatccgcacgaggtc
ctgcgtgtgcagggtccgcgtgaggtgcagatccacctggtccacgaggtccaggaggtc
taccgggcccagggcgtgtcgatccacgacaagcacatcgaggtcatcgtccggcagatg
ctgcgtcgcgtcacgatcatcgattcgggtgcgacggagttcctgcccggctcgctgacc
gagcgtgcggagttcgagtcggagaaccgtcgcgtcgtcgcggaaggtggcgagcccgcc
gccggccgtccggtgctgatgggtatcacgaaggcatcgctggccaccgattcgtggctg
tcggcggcgtcgttccaggagaccactcgcgtgctgaccgatgcggcgatcaactgccgc
agcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctgatcccggccggt
accggtatcaaccgctaccgcaacatccaggtgcagccgaccgaagaggcccgcgctgcg
gcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggccaggcgacc
ggcgctgcggtgccgctggacgattacgggtacagcgactaccgctag
DBGET
integrated database retrieval system
