Manis javanica (Malayan pangolin): 108400268
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Entry
108400268 CDS
T06054
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X2
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjv03021
]
108400268 (CHD1)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108400268 (CHD1)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108400268 (CHD1)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
108400268 (CHD1)
SLIK complex
108400268 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
108400268
NCBI-ProteinID:
XP_017521006
LinkDB
All DBs
Position
Unknown
AA seq
1787 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSPSVSRSGSSSGSSSDGSSSQSGTSDSDSASESGS
PSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAVLKQQQHASSNSGSEEDSSS
SEDSDDSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEGDKSSCDETESDYEPKNKVKSR
KSQNRSKSKNGKKILGQKKRQIDSSEEEEDDEEDYDNDKRSSRRQATVNVSYKEDEEMKT
DSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDPNAEFEKN
KEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPED
VEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIS
KKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLN
WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQ
TWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAF
IGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWED
FEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWIL
TRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKL
ILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHF
NAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIY
RLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILK
FGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSNMDED
DIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRS
RSRRYSGSDSDSVSERKSPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDA
IARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKMKGPTFRISGVQVN
AKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKPAHFDIDWGKEDDSNLLIGIYEYGY
GSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLKDFARKEAQRLSGAGGL
KKRKARTKKNKAIKSVKVKEDIKSDSSPLPSEQSDEDDDKDEITSVKHPNKKIKTERDSE
EKPEPDVSIKKETEEKRETKEKENKREHKREIKEKEIKKDIKEKDFKEKRENKVKEAMQK
EKDIKEEKLSESKSDGKERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFSICKERM
RPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIF
VSKFTEFDARKLHKLYKHAIKKRQESQQINDQNSNLNVQVIRNPDVERLKENTNHDDSSR
DSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSER
EKRRKVDDHRSRDHRLEGSLKDRSHSDHRSHSDHRLHSDHRSSSEYIHHKSSRDYRHHSD
WQMDYRASNSGPRSPLDQRSPFGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccaatca
gatgatgattctgggtcaccttcagtctctcgctctggctcgagttctggaagcagtagt
gatggaagcagcagccagtcaggtaccagtgactctgactctgcatctgaatcgggcagt
ccgtcagagtccgagtcagacacctcccgagaaaacaaggttcaagcaaaaccaccgaaa
gtcgatggagctgagttctggaagtccagccctagtattctggctgtgcagagatctgca
gtgctcaaacagcagcaacatgcctcatcaaatagtggatcagaagaggattcttcgagc
agtgaagattctgatgactcaagtgaagtcaaaaggaaaaagcataaagatgaagattgg
caaatgtctgggtcaggatctccgtctcagtctggttcagattcagaatctgaaggagat
aaaagcagttgtgatgaaacagaatctgattatgagccaaaaaacaaagttaaaagcaga
aaatctcaaaatagatctaagtcaaagaatgggaagaagattcttggacaaaaaaagaga
cagattgattcatctgaggaggaagaggatgatgaagaagattatgataatgataaaaga
agttctcgtcgccaagcaactgtcaatgttagctataaggaagatgaagaaatgaaaaca
gattctgatgacctacttgaagtctgtggtgaggatgttcctcaacctgaggaagaagaa
tttgaaacaatagaacgatttatggactgtcggattgggagaaaaggagccactggtgct
actacaaccatctatgcagttgaagcagatggtgacccaaatgcagaatttgaaaaaaac
aaggaaccaggagagatccaatatttaattaagtggaaaggctggtcccatatccacaat
acttgggagacagaagaaacccttaaacagcagaatgttagaggaatgaaaaaattggat
aattataagaaaaaagaccaggagacaaaaagatggttgaaaaatgcttctccagaagat
gtggaatattataattgccagcaggaacttacagatgatctacataaacagtatcaaata
gtggaacgaataattgctcattccaatcaaaagtcagcagctggttatcctgattattat
tgcaagtggcagggccttccatactcagagtgcagctgggaagatggagctctcatttcc
aaaaagtttcaagcatgcatagatgagtattttagcaggaatcagtcaaaaaccactcct
tttaaagattgcaaagtattaaaacaaaggccaagatttgtagccctaaagaagcagcca
tcctatattggaggacatgaaggattagaactaagagattatcaactgaatggtttaaat
tggcttgctcattcttggtgcaaaggaaatagttgcatacttgctgatgaaatgggcctt
ggaaaaacaatacagacgatctcatttctgaactatttgtttcatgaacatcaattatat
ggaccttttctattagtagtaccactttccacactcacttcctggcaaagggaaattcag
acatgggcttctcaaatgaatgctgtggtttatttaggcgacattaacagcagaaacatg
atcagaactcatgaatggatgcatccccagaccaaacggttaaaatttaatatactatta
acaacttatgaaattctgttaaaggataaggcattccttggaggtctaaattgggcattt
ataggtgtagatgaagcacatcgattaaagaatgatgattctctcctatataaaacttta
atagactttaagtccaatcaccgtctccttatcactggaactcctctacaaaactccctc
aaagagctctggtctttgctacatttcattatgccagaaaagttttcttcctgggaagat
tttgaagaagaacatggcaaaggcagagaatatggttatgcaagccttcacaaagagctt
gagccgtttctgttacgcagagttaaaaaagatgtggaaaaatctcttcctgccaaggtt
gagcagattctaagaatggaaatgagtgctttacagaaacaatattacaaatggatatta
actagaaattacaaagccctcagcaaaggttccaagggcagtacctcaggctttttgaac
attatgatggagctaaagaaatgttgtaaccattgctacctcattaaaccaccagacaat
aatgaattctataataaacaggaggccttacaacacctaatccgtagtagcggaaaattg
attcttcttgacaagctgttaattcgcctaagagaaagaggcaacagagttcttattttt
tctcaaatggtgcggatgttagatatacttgcagaatatttgaaataccgtcagttcccc
tttcaaagattagatggatcaataaaaggggagctgaggaaacaagctctagatcatttt
aatgctgaaggatcagaggatttctgttttctactttccacaagagctggaggtctagga
attaatttagcctctgctgatactgttgttatatttgattctgattggaatccacagaat
gatcttcaggcacaggctagagctcatcgaattgggcaaaagaaacaggtgaatatttat
cgactagtcacaaagggatcagttgaagaggatattcttgaaagggctaaaaagaagatg
gttttagatcatcttgtgattcaaagaatggacacaactgggaagacagtgctacacact
ggttctgccccctcaagttctactcctttcaataaagaagagttatcagccattttaaag
tttggtgctgaagaactttttaaggaacctgaaggagaagaacaagagccccaggaaatg
gatatagatgaaatcttgaagagggctgaaactcatgaaaatgaaccaggccctttaact
gtcggagatgaattgctttcccagttcaaggttgccaacttttcaaatatggatgaagat
gacattgagttggaacctgaaagaaattcaaagaattgggaagaaatcattccagaagat
caaagaagacgattagaagaggaagaaagacaaaaggaacttgaagaaatttatatgctc
ccaagaatgagaaactgtgccaaacagattagtttcaatggaagtgaagggaggcgtagt
agaagtaggagatactctggatctgatagtgattctgtctcagaaaggaagagtccaaag
aaacgtggaaggccacggactatccctcgggagaatattaaaggatttagtgatgcagaa
attcggcggtttatcaagagttacaagaaatttggtggccctctggaaagattagatgca
attgctcgagatgctgaattagttgataagtcagagacagacctcagacgactaggagaa
ttggtacataatggttgcattaaagctttaaaggataattcttcaggaacggaaagaaca
ggtggtagacttggaaaaatgaagggcccaacattccgaatatcaggagtacaggtgaat
gccaagctggtcatctcccatgaagaagaattaataccattgcacaaatccattccttca
gatccagaagaaagaaaacaatatactatcccatgccatacaaagccagctcattttgat
atagactggggcaaagaagatgattccaatttgttgattggtatctatgagtatggatat
ggaagctgggaaatgattaaaatggatcctgatctcagtctaacacacaagattcttcca
gacgatcctgataaaaaaccacaagcaaaacagttgcagacacgtgcagactacctcatc
aaattacttaaagattttgcaagaaaagaagctcagagactttctggtgcaggaggttta
aagaagagaaaagcaagaactaagaagaataaagcaataaagtctgtaaaagtgaaagag
gacataaagagtgattcttctcccctgccctcagaacagtctgatgaagatgatgataag
gatgagatcacttctgtgaaacatccaaataaaaaaattaaaacagaaagagacagtgaa
gaaaaacctgagccagatgtttctataaagaaggaaacagaagaaaagagggaaacaaaa
gaaaaggagaataaaagagaacataaaagggagataaaagaaaaagagattaagaaagat
ataaaggaaaaagattttaaagaaaaaagagaaaacaaagtaaaagaagctatgcagaaa
gaaaaagacataaaggaagaaaagctaagcgaatctaagtctgatggcaaagaaagatcc
aagaaatcttcagtgtcagatgctccagttcatatcactgcaagtggtgaaccagttccc
atatctgaagaatctgaagagctggatcagaagacattcagcatttgtaaagaaagaatg
aggcctgtcaaagcagctctgaaacaacttgataggcctgagaaaggcctgtcagaaaga
gaacaactggagcatactagacagtgtttaataaaaattggagaccatatcacagaatgt
ctgaaagagtattcaaaccctgagcaaattaagcaatggagaaaaaacctgtggattttt
gtatctaagtttactgagtttgatgcaagaaaattacataaattatataagcatgctatt
aaaaaacggcaggaatctcagcaaatcaatgaccagaacagcaacttgaatgttcaggtg
attagaaatccagatgtggaaagattaaaagagaatacaaatcacgatgatagcagcagg
gacagttattcatctgatagacatttatctcagtatcatgatcatcataaagaccgacat
cagggagattcttacaaaaagagtgactctaggaaaaggccctattcttcttttagtaac
ggtaaagaccatcgtgattgggaccactacaagcaagacagcagatattacagtgagaga
gagaaacgcagaaaagtggatgatcacaggagtagagatcacaggttggaaggaagttta
aaagatagatctcattctgatcatcgctctcattcagaccatcggttacattcagaccat
cggtcaagttctgaatatatacaccataaatcttccagggattataggcatcactcagat
tggcaaatggactacagagcttccaatagtggccccagatcaccactagatcagagatct
ccttttggctccagatctccatttgaacactcaattgaacacaaaagtacacctgagcat
acctggagtagtcggaaaacataa
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integrated database retrieval system