KEGG   Manis javanica (Malayan pangolin): 108400268
Entry
108400268         CDS       T06054                                 
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X2
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mjv  Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mjv03021]
    108400268 (CHD1)
   03036 Chromosome and associated proteins [BR:mjv03036]
    108400268 (CHD1)
Transcription machinery [BR:mjv03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     108400268 (CHD1)
Chromosome and associated proteins [BR:mjv03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     108400268 (CHD1)
    SLIK complex
     108400268 (CHD1)
SSDB
Motif
Pfam: SNF2-rel_dom CDH1_2_SANT_HL1 CHD1-like_C Chromo Helicase_C DEAD
Other DBs
NCBI-GeneID: 108400268
NCBI-ProteinID: XP_017521006
LinkDB
Position
Unknown
AA seq 1787 aa
MNGHSDEESVRNSSGESSQSDDDSGSPSVSRSGSSSGSSSDGSSSQSGTSDSDSASESGS
PSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAVLKQQQHASSNSGSEEDSSS
SEDSDDSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEGDKSSCDETESDYEPKNKVKSR
KSQNRSKSKNGKKILGQKKRQIDSSEEEEDDEEDYDNDKRSSRRQATVNVSYKEDEEMKT
DSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDPNAEFEKN
KEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPED
VEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIS
KKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLN
WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQ
TWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAF
IGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWED
FEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWIL
TRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKL
ILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHF
NAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIY
RLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILK
FGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSNMDED
DIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRS
RSRRYSGSDSDSVSERKSPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDA
IARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKMKGPTFRISGVQVN
AKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKPAHFDIDWGKEDDSNLLIGIYEYGY
GSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLKDFARKEAQRLSGAGGL
KKRKARTKKNKAIKSVKVKEDIKSDSSPLPSEQSDEDDDKDEITSVKHPNKKIKTERDSE
EKPEPDVSIKKETEEKRETKEKENKREHKREIKEKEIKKDIKEKDFKEKRENKVKEAMQK
EKDIKEEKLSESKSDGKERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFSICKERM
RPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWIF
VSKFTEFDARKLHKLYKHAIKKRQESQQINDQNSNLNVQVIRNPDVERLKENTNHDDSSR
DSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSER
EKRRKVDDHRSRDHRLEGSLKDRSHSDHRSHSDHRLHSDHRSSSEYIHHKSSRDYRHHSD
WQMDYRASNSGPRSPLDQRSPFGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq 5364 nt   +upstreamnt  +downstreamnt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccaatca
gatgatgattctgggtcaccttcagtctctcgctctggctcgagttctggaagcagtagt
gatggaagcagcagccagtcaggtaccagtgactctgactctgcatctgaatcgggcagt
ccgtcagagtccgagtcagacacctcccgagaaaacaaggttcaagcaaaaccaccgaaa
gtcgatggagctgagttctggaagtccagccctagtattctggctgtgcagagatctgca
gtgctcaaacagcagcaacatgcctcatcaaatagtggatcagaagaggattcttcgagc
agtgaagattctgatgactcaagtgaagtcaaaaggaaaaagcataaagatgaagattgg
caaatgtctgggtcaggatctccgtctcagtctggttcagattcagaatctgaaggagat
aaaagcagttgtgatgaaacagaatctgattatgagccaaaaaacaaagttaaaagcaga
aaatctcaaaatagatctaagtcaaagaatgggaagaagattcttggacaaaaaaagaga
cagattgattcatctgaggaggaagaggatgatgaagaagattatgataatgataaaaga
agttctcgtcgccaagcaactgtcaatgttagctataaggaagatgaagaaatgaaaaca
gattctgatgacctacttgaagtctgtggtgaggatgttcctcaacctgaggaagaagaa
tttgaaacaatagaacgatttatggactgtcggattgggagaaaaggagccactggtgct
actacaaccatctatgcagttgaagcagatggtgacccaaatgcagaatttgaaaaaaac
aaggaaccaggagagatccaatatttaattaagtggaaaggctggtcccatatccacaat
acttgggagacagaagaaacccttaaacagcagaatgttagaggaatgaaaaaattggat
aattataagaaaaaagaccaggagacaaaaagatggttgaaaaatgcttctccagaagat
gtggaatattataattgccagcaggaacttacagatgatctacataaacagtatcaaata
gtggaacgaataattgctcattccaatcaaaagtcagcagctggttatcctgattattat
tgcaagtggcagggccttccatactcagagtgcagctgggaagatggagctctcatttcc
aaaaagtttcaagcatgcatagatgagtattttagcaggaatcagtcaaaaaccactcct
tttaaagattgcaaagtattaaaacaaaggccaagatttgtagccctaaagaagcagcca
tcctatattggaggacatgaaggattagaactaagagattatcaactgaatggtttaaat
tggcttgctcattcttggtgcaaaggaaatagttgcatacttgctgatgaaatgggcctt
ggaaaaacaatacagacgatctcatttctgaactatttgtttcatgaacatcaattatat
ggaccttttctattagtagtaccactttccacactcacttcctggcaaagggaaattcag
acatgggcttctcaaatgaatgctgtggtttatttaggcgacattaacagcagaaacatg
atcagaactcatgaatggatgcatccccagaccaaacggttaaaatttaatatactatta
acaacttatgaaattctgttaaaggataaggcattccttggaggtctaaattgggcattt
ataggtgtagatgaagcacatcgattaaagaatgatgattctctcctatataaaacttta
atagactttaagtccaatcaccgtctccttatcactggaactcctctacaaaactccctc
aaagagctctggtctttgctacatttcattatgccagaaaagttttcttcctgggaagat
tttgaagaagaacatggcaaaggcagagaatatggttatgcaagccttcacaaagagctt
gagccgtttctgttacgcagagttaaaaaagatgtggaaaaatctcttcctgccaaggtt
gagcagattctaagaatggaaatgagtgctttacagaaacaatattacaaatggatatta
actagaaattacaaagccctcagcaaaggttccaagggcagtacctcaggctttttgaac
attatgatggagctaaagaaatgttgtaaccattgctacctcattaaaccaccagacaat
aatgaattctataataaacaggaggccttacaacacctaatccgtagtagcggaaaattg
attcttcttgacaagctgttaattcgcctaagagaaagaggcaacagagttcttattttt
tctcaaatggtgcggatgttagatatacttgcagaatatttgaaataccgtcagttcccc
tttcaaagattagatggatcaataaaaggggagctgaggaaacaagctctagatcatttt
aatgctgaaggatcagaggatttctgttttctactttccacaagagctggaggtctagga
attaatttagcctctgctgatactgttgttatatttgattctgattggaatccacagaat
gatcttcaggcacaggctagagctcatcgaattgggcaaaagaaacaggtgaatatttat
cgactagtcacaaagggatcagttgaagaggatattcttgaaagggctaaaaagaagatg
gttttagatcatcttgtgattcaaagaatggacacaactgggaagacagtgctacacact
ggttctgccccctcaagttctactcctttcaataaagaagagttatcagccattttaaag
tttggtgctgaagaactttttaaggaacctgaaggagaagaacaagagccccaggaaatg
gatatagatgaaatcttgaagagggctgaaactcatgaaaatgaaccaggccctttaact
gtcggagatgaattgctttcccagttcaaggttgccaacttttcaaatatggatgaagat
gacattgagttggaacctgaaagaaattcaaagaattgggaagaaatcattccagaagat
caaagaagacgattagaagaggaagaaagacaaaaggaacttgaagaaatttatatgctc
ccaagaatgagaaactgtgccaaacagattagtttcaatggaagtgaagggaggcgtagt
agaagtaggagatactctggatctgatagtgattctgtctcagaaaggaagagtccaaag
aaacgtggaaggccacggactatccctcgggagaatattaaaggatttagtgatgcagaa
attcggcggtttatcaagagttacaagaaatttggtggccctctggaaagattagatgca
attgctcgagatgctgaattagttgataagtcagagacagacctcagacgactaggagaa
ttggtacataatggttgcattaaagctttaaaggataattcttcaggaacggaaagaaca
ggtggtagacttggaaaaatgaagggcccaacattccgaatatcaggagtacaggtgaat
gccaagctggtcatctcccatgaagaagaattaataccattgcacaaatccattccttca
gatccagaagaaagaaaacaatatactatcccatgccatacaaagccagctcattttgat
atagactggggcaaagaagatgattccaatttgttgattggtatctatgagtatggatat
ggaagctgggaaatgattaaaatggatcctgatctcagtctaacacacaagattcttcca
gacgatcctgataaaaaaccacaagcaaaacagttgcagacacgtgcagactacctcatc
aaattacttaaagattttgcaagaaaagaagctcagagactttctggtgcaggaggttta
aagaagagaaaagcaagaactaagaagaataaagcaataaagtctgtaaaagtgaaagag
gacataaagagtgattcttctcccctgccctcagaacagtctgatgaagatgatgataag
gatgagatcacttctgtgaaacatccaaataaaaaaattaaaacagaaagagacagtgaa
gaaaaacctgagccagatgtttctataaagaaggaaacagaagaaaagagggaaacaaaa
gaaaaggagaataaaagagaacataaaagggagataaaagaaaaagagattaagaaagat
ataaaggaaaaagattttaaagaaaaaagagaaaacaaagtaaaagaagctatgcagaaa
gaaaaagacataaaggaagaaaagctaagcgaatctaagtctgatggcaaagaaagatcc
aagaaatcttcagtgtcagatgctccagttcatatcactgcaagtggtgaaccagttccc
atatctgaagaatctgaagagctggatcagaagacattcagcatttgtaaagaaagaatg
aggcctgtcaaagcagctctgaaacaacttgataggcctgagaaaggcctgtcagaaaga
gaacaactggagcatactagacagtgtttaataaaaattggagaccatatcacagaatgt
ctgaaagagtattcaaaccctgagcaaattaagcaatggagaaaaaacctgtggattttt
gtatctaagtttactgagtttgatgcaagaaaattacataaattatataagcatgctatt
aaaaaacggcaggaatctcagcaaatcaatgaccagaacagcaacttgaatgttcaggtg
attagaaatccagatgtggaaagattaaaagagaatacaaatcacgatgatagcagcagg
gacagttattcatctgatagacatttatctcagtatcatgatcatcataaagaccgacat
cagggagattcttacaaaaagagtgactctaggaaaaggccctattcttcttttagtaac
ggtaaagaccatcgtgattgggaccactacaagcaagacagcagatattacagtgagaga
gagaaacgcagaaaagtggatgatcacaggagtagagatcacaggttggaaggaagttta
aaagatagatctcattctgatcatcgctctcattcagaccatcggttacattcagaccat
cggtcaagttctgaatatatacaccataaatcttccagggattataggcatcactcagat
tggcaaatggactacagagcttccaatagtggccccagatcaccactagatcagagatct
ccttttggctccagatctccatttgaacactcaattgaacacaaaagtacacctgagcat
acctggagtagtcggaaaacataa

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