Manis javanica (Malayan pangolin): 108403316
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Entry
108403316 CDS
T06054
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108403316 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mjv01001
]
108403316 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjv03021
]
108403316 (TAF1)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108403316 (TAF1)
Enzymes [BR:
mjv01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
108403316 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108403316 (TAF1)
Protein kinases [BR:
mjv01001
]
Serine/threonine kinases: Other
TAF1 family
108403316 (TAF1)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108403316 (TAF1)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108403316 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Opi1
Motif
Other DBs
NCBI-GeneID:
108403316
NCBI-ProteinID:
XP_036858615
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MGSGWDLLLVASAFGAAAIMSDTDSDEDSAGGGSFSLTGFLFGNINGAGQLEGESILDDE
CKKHLAGLGALGLGSLITELTANEELTGTDGALVNDEGWIRSTEDAVDYSDINEVAEDES
RRCQQTMGSLQPLCNSDYDEDDYDADCEDIDCKLMPPPPPPAGPMKKDKDQDAITCVSED
GEGIILPSIIAPSSLASEKVDFSSSSDSESEMGPQEVTQAESENGKLTLPLAGIMQYDAT
KLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQEVEC
SVESEANQKSLWNYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDTDKVTDTKPRVAE
WRYGPARLWYDMLGVPEDGSGFDYGFKLRKMEHEPVIKNRLMEDFRKLEESNGSDLLADE
NFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGFAATLDD
DKPWYSIFPIDNEELVYGCWEDNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEEA
TSNSPCKESKKESSLKKSRILLGKTGVIKEEPQQNMCQPEVKDPWNLSNDEYYYPKQQGL
RGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLL
KHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATKI
KNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPET
DFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKD
RPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMV
SPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIA
AMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSL
KNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQE
RYKEECQRIFDLQNKVLSSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSRE
REEQERKELQRMLLAAGSAAAGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYV
RCETVRKPAVIDAYVRIRNTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEK
EKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQE
EELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGT
TVHCDYLNRPHKSIHRRRTDPMVTLSSILECIISDMRELPNTYPFHTPVNGKVVKDYYKI
ITRPMDLQTLRENVRKRLYPSREEFRDHLELIVKNSATYNGPKHSLTQISQSMLDLCDEK
LKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVADSWPFHHPVNKKFVPDY
YKVIVSPMDLETIRKNISKHKYQGRDSFLDDVNLILANSVKYNGPESQYTKTAQEIVNIC
YQTLTEYDEHLTQLEKDICTAKEAALEEVDLESLDPMTPGPYTPQAKPPDLYDNNTSLSM
SRDASVFQDESNMSVLDIPTGTPEKQVTEESEDADGDLADEEEGTVQQPQASVLYEDLLM
SEGEDDEEDAGSEEEGDNPFSAIQLSESGSDSDVGSGGIRPKQPCMLQENTRMGLENEES
MMSYEGDGGEASHGLEDSNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEEDEEEEQRS
GPSVLSQVQLSEDEEDSEDFHSIAGDSDVDSDE
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaggctgggatttgctcttggtggcttccgcttttggcgctgccgccatcatg
tcagacacggacagcgatgaggattctgcgggaggcggctcattttctttaaccggtttc
ctctttggcaacatcaatggagccgggcagctggagggggaaagcatcttggatgatgag
tgtaagaagcacttggcaggcttgggggctttgggtctgggcagcctgatcactgaactc
accgcaaatgaagaactgactgggactgatggtgccctggtaaatgatgaaggctggatc
aggagtacagaagatgctgtggactattcagacatcaatgaggtagcggaagacgaaagc
cgaaggtgtcagcagacaatggggagcttacagcccctttgcaactcagattatgatgaa
gatgactatgatgctgattgtgaagacattgattgcaagttgatgcctcctccacctcca
cctgcaggacctatgaagaaggataaagaccaagatgctattacctgtgtgtctgaggat
ggagaaggcatcatcttgccctccatcattgccccttcctctttggcctcagagaaagtg
gacttcagtagttcctctgactcagaatctgagatgggacctcaggaagtaacacaggca
gaatctgagaacggaaagctgaccctaccattggctgggattatgcagtatgatgccacc
aagctgttgccaagtgtcacagaacttttcccagaatttcgacctggaaaggtgttacgc
ttcctacgtctttttgggccagggaagaacgtcccatctgtttggcggagtgctcggaga
aagaggaaaaagaagcaccgtgagctgatacaagaagagcagatccaggaggtggagtgc
tcagtagaatcagaagccaaccagaagtctttgtggaactatgactacgctccaccacca
cctccagaacagtgtctctctgatgatgaaatcacaatgatggctcctgtggagtccaaa
ttttcccagtcaactggagatacagataaagtgacagataccaaaccaagagtggctgag
tggcgttacggccctgcccgactgtggtatgatatgctgggtgtccctgaagatggcagt
gggtttgactatggcttcaaactgagaaagatggaacatgaacctgtgataaaaaataga
ttgatggaggactttaggaagcttgaggaaagcaatggctctgatcttctggctgatgaa
aacttcctgatggtgacacagctgcattgggaggatgatatcatctgggatggagaggat
gtcaaacacaaagggacaaaacctcagcgtgcaagcctggcaggctggcttccttccagc
atgacacgtaatgccatggcttataacgttcagcaaggttttgcagccaccctggatgat
gacaagccttggtattccattttccccattgacaatgaggagctagtatatggatgctgg
gaggacaatatcatttgggatgcccaggccatgccccgactgttggagcctcctgttctg
acacttgatcccaatgatgagaacctcattttggaaattcctgatgagaaggaagaagcc
acctctaactccccctgtaaggagagcaagaaggaatcatctctgaagaagagtagaatt
ctcttagggaaaacaggtgtcatcaaggaggaaccacagcagaacatgtgtcagccagaa
gtgaaagatccatggaatctctccaatgatgaatattactaccccaagcaacagggtctt
agaggcacttttggaggaaatattatccagcactcaattcctgctgtggagttacggcag
cccttctttcccacccacatggggcccatcaaactccggcagttccatcgcccacctctg
aagaagtattcctttggggcactatctcagccaggtcctcattcagtccagcccttgcta
aagcatatcaaaaagaaggctaagatgagagaacaggagaggcaagcttcaggtggtgga
gagatgttttttatgcgcacacctcaggacctcacaggcaaagatggagatcttattctt
gcagaatacagtgaggaaaatggaccattaatgatgcaggttggaatggcaaccaagata
aaaaactactataagcggaaacctggaaaagaccctggagcccctgattgtaaatacgga
gaaactgtttactgccatacatctccttttctgggatctctccatcctggccaattactg
caggcatttgagaacaacctttttcgggccccaatttaccttcataaaatgccagaaact
gactttcttatcattcggacaagacaaggttactatattcgggaattagtggatattttt
gtggttggccagcagtgccccttgtttgaagttcctgggcctaactccaaaagggcgaat
acacacattcgagactttctgcaggtttttatttaccgcctcttctggaagagtaaagat
cggccacggcggatccgaatggaagatataaaaaaagcctttccttcccattcagaaagc
agcatccggaagaggctaaagctctgcgctgacttcaaacgcacagggatggactcaaac
tggtgggtgctgaaatctgattttcgtttaccaactgaagaggagatcagagctatggtg
tctccagagcagtgctgtgcttattatagcatgatagctgctgagcagcgactaaaggat
gctggctatggtgagaagtccttttttgctccagaagaagaaaatgaagaagattttcag
atgaagattgatgatgaggttcgcacagctccttggaacaccacaagggccttcattgct
gccatgaagggcaagtgtctcctagaggtgactggagtggcagatcccacagggtgtggt
gaagggttctcgtatgtgaagattccaaacaaaccaacacagcagaaggatgataaggag
cctcagccagtgaagaaaacagtgacaggaacagatgcagatctccgtcgcctctctctg
aaaaatgccaagcaacttcttcgtaaattcggcgtgcctgaggaagagattaaaaagttg
tcccgctgggaagtgattgatgtggtacgcacaatgtcaacagaacaggcccgctctgga
gagggacccatgagtaaatttgctcgtggatcaaggttttctgtggctgagcatcaagag
cgttacaaagaggaatgtcagcgcatctttgacctgcagaacaaggttttgtcatcaact
gaagtcttatcaactgacacagacagcagctcagctgaagacagtgactttgaagaaatg
ggaaagaacatcgagaacatgttgcagaataagaaaaccagttctcagctatcacgtgaa
cgggaggagcaggagcggaaggaactacagcggatgttattggcagcaggctcagcagca
gcaggtaacaatcacagagatgatgacacagcttctgtgactagcctgaactcttctgcc
actggccgttgtctcaagatttatcgcacatttcgagatgaagaagggaaagagtatgtt
cgctgtgagacagttagaaagccagctgtcattgatgcctatgtgcgcatacggaacaca
aaagatgaggaattcattcgaaaatttgccctttttgatgagcagcatcgagaagagatg
cgaaaagaacggcgcaggattcaagagcagctgaggcggcttaagagaaaccaggaaaag
gagaagcttaagggccctcctgagaagaagcccaaaaaaatgaaggagcgtcctgacctg
aaactgaaatgtggggcttgtggtgcgattgggcacatgaggacaaacaaattctgcccc
ctctattatcaaacaaatgccccaccttccaaccctgttgccatgactgaagagcaggag
gaggagttggaaaagacagtcattcataatgataatgaagaacttatcaaggttgaaggg
accaagattgtcttggggaaacagctaattgagagcgcagatgaagttcgcagaaaatct
ctggttctcaagttccctaaacagcaacttcctccaaagaagaaacggcgagttggaacc
actgttcactgtgactatttgaatagacctcataagtccatccaccggcgccggacagac
cccatggtgacattgtcctccatcttggagtgtatcatcagtgacatgagagagcttcca
aatacataccctttccacactccagtcaatggaaaggttgtaaaggactactacaaaatt
atcactcgaccaatggacttacaaacactccgtgaaaatgtgcgtaaacgcctctaccca
tctcgggaagagttcagagaccatttggaattaattgtaaaaaacagtgcaacttacaat
ggtccgaagcactcactgacccagatctctcaatccatgctggatctttgtgatgaaaaa
ctcaaagagaaagaagacaaattggctcgtttagagaaagctatcaacccgttgctggat
gatgatgaccaagtggcattttctttcattctagacaacattgtcacccagaaaatgatg
gcagttgcagattcttggccatttcatcacccagttaataagaagttcgttccagattat
tacaaagtgattgtgagtccaatggatttagagactatacgtaagaatatctccaagcac
aagtatcagggtcgggacagctttctggatgatgtcaaccttattctggccaacagtgtt
aagtataatgggcctgagagtcagtatactaagactgctcaggagattgtgaacatctgt
taccagacattgactgagtatgatgagcatttgactcaacttgagaaggatatttgtaca
gctaaagaagcagctttggaggaagtagatttagaaagcttggaccccatgactccaggc
ccttacacaccccaggctaagcctcctgatttgtatgataacaacacatccctcagtatg
tctcgagatgcctctgtatttcaagatgagagcaatatgtctgtcctggatattcctact
ggcactccagaaaagcaggtaacagaggaaagtgaagatgcagatggtgatcttgcagat
gaagaggaaggaactgtgcaacagcctcaagccagtgtcctgtatgaggatttgcttatg
tctgaaggagaagatgatgaggaagatgctgggagtgaagaagaaggagataatcctttc
tctgctatccagctgagtgaaagtggaagtgactccgatgtaggatctggtgggataaga
cccaaacagccctgcatgcttcaagagaacacaaggatgggcctggaaaatgaagaaagc
atgatgtcctatgagggagacggtggggaggcttctcatggtttggaggatagcaacatc
agttatgggagctatgaggagcctgatcccaagtcgaacacccaagacacaagcttcagc
agcatcggtgggtatgaggtatcagaggaggaagaagatgaggaggaagagcagcgctct
gggccaagcgtactaagccaggtccaactgtcagaggacgaggaggacagtgaggatttc
cactccattgctggggacagtgacgtggactctgatgaatga
DBGET
integrated database retrieval system
