Methanocorpusculum labreanum: Mlab_0020
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Entry
Mlab_0020 CDS
T00472
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mla
Methanocorpusculum labreanum
Pathway
mla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mlab_0020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mla03019
]
Mlab_0020
03400 DNA repair and recombination proteins [BR:
mla03400
]
Mlab_0020
Enzymes [BR:
mla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mlab_0020
Messenger RNA biogenesis [BR:
mla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mlab_0020
DNA repair and recombination proteins [BR:
mla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mlab_0020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
RQC
Motif
Other DBs
NCBI-ProteinID:
ABN06198
UniProt:
A2SPE2
LinkDB
All DBs
Position
complement(21302..22783)
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AA seq
493 aa
AA seq
DB search
MTKGIQQTLEKYFHHQTFRPNQQEIIEKIVSGRDVLAVMATGGGKSLCYQLPALMLDGMT
IVISPLIALMKDQVDSLSNQGVTVETLNSLQTYDERRRVEQDMRDGKVRILYVSPERAVT
PAFFATLSGCKVALFAVDEAHCISMWGHQFRPEYREIKHLRDKFPGVPIAAFTATATLRV
REDIVNELRLNDPAEFIGSFDRRNLRYSVFAEPNAQVRMQKIISYVTAHKDDPGIIYCFS
RASTEELAERLRKVHIMANPYHAGLPTPERSRVQEGFLNNSIRVICATVAFGMGIDKPDV
RYVIHAHMPKDIESYYQETGRAGRDGKAGECLLFYSGGDRRKIENMLEREFTDKKKSEIA
REKLDQMYAYCTAKSCRRQLLLSYFDEEIQPCGNCDTCGDKKIKQSKPAGSLTKMILTGV
QDVDGILTTPEFISFLLGLERAKTVKLQLNTHPLFGAANGREREEIEKEVSSLLKSGRLR
LEGKTVRKLCSGN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagggatacagcagacactggaaaaatacttccaccaccagacgttccgtcct
aaccagcaggagatcatcgaaaagatcgtcagcgggagggacgttctcgcagtgatggcg
accggcgggggaaaatccctctgttaccagctcccggccctgatgcttgacgggatgacg
atcgtcatctctcccctgattgctctaatgaaagatcaagtggactcgctttcgaatcag
ggggtgacggtcgagaccttaaacagtctgcaaacctacgacgaacgacgaagagtcgag
caggatatgcgtgacggaaaagtcaggatcctgtacgtctcgccggaacgggcagtgact
ccggcattttttgcgacgctttccggctgcaaggtggcgctttttgccgtagacgaggca
cactgcatctcgatgtggggtcatcagttcaggcccgaatatcgggagatcaaacatctg
agggacaagttcccgggtgttccgatcgccgcttttaccgccacggctactcttcgggta
cgcgaagatatcgtaaacgaactgagactgaacgatcccgctgaattcatcggaagtttc
gaccggagaaatctccggtactcggtatttgctgagccgaatgcccaggtacggatgcag
aaaattatcagttacgtcaccgcccacaaagatgatccggggatcatctactgcttctcg
cgggcgagtaccgaagaactggcggagcgccttcgaaaggtgcatatcatggcaaatccg
tatcatgccggcctgccgaccccggaacggagccgggtgcaggaaggatttctcaataac
tcaatcagggtgatctgtgcaacggtggcgttcgggatggggatcgataaacctgacgtc
agatatgtgatccatgcccatatgccaaaagacatcgagtcctactatcaggagacggga
cgggcagggagagacggaaaagccggggagtgcctgctgttctattcgggcggcgaccgg
cgcaagatagaaaatatgctcgaacgtgagttcaccgataagaaaaaatccgagatcgcc
cgggagaagctggaccagatgtatgcctactgcacggccaaatcgtgccgaagacagctg
ctcctttcctacttcgacgaagaaatacagccctgcgggaactgcgatacctgcggggac
aaaaaaataaagcagagcaagccggcgggcagtctcacgaagatgatccttacaggagtg
caggatgtggacgggattctaacgacgcccgagttcatctcgttccttctcggtctcgaa
cgggcaaagacggtaaaacttcagctgaacacgcatccgttgttcggtgcggcgaacgga
agggagagagaagagatcgaaaaggaagtcagcagtcttctcaaatccggcaggctccgt
cttgaaggaaaaaccgttcgaaaactgtgctcaggaaattga
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