Methanospirillum lacunae: ACKUB0_08240
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Entry
ACKUB0_08240 CDS
T11317
Name
(GenBank) DNA-directed RNA polymerase subunit A'
Organism
mlaa Methanospirillum lacunae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
XLR77391
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Position
1697478..1700138
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AA seq
886 aa
AA seq
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MPSPKRIGRIEFGLLSPKEIRQMSVRKIIWADTYDDDGFPYPQGLMDLHLGVIDPGLRCK
TCSQKAGECPGHFGHIELAKPVIHVGYTRLIRKLLRVTCRECGRLLLSPEEIEKIMGPED
ESSGDSLSEKDVKKERICPHCGEQQLKINFEKPTTFAEVTTDDRGKKVENKLTPADIRAR
LEKIPDEDLIHLGIEPSVARPEWTILTVLPVPPVTMRPSIILENGQRSEDDLTHKLVDII
RINQRFKENQDAGAPQLIIEDLWELLQYHVTTYMDNEVAGCPPARHRSGRPLKTLSQRLK
GKDGRFRGSLSGKRVNFSSRTVISPSPNLSVNEVGIPLKIANEMTIPVQATIYNIDELRQ
IVKIGPERPWVKSPCGANYVIRPDKRRIRLVKGTGTEDGNLEFVSEQIEPGWIVERHLRD
GDIVLFNRQPSLHRMSIMAHWVKLMDGKTFRLNPAVCPPYNADFDGDEMNLHIPQTEEAR
AEAAMLASVQENILSPRFGGPIIGGIHDHISGIFLLTHELRWFTKSEAIDLLKNNNVDRL
GKPGKVENGVNYWSNKQVFSRILPSDMNMVFQASSCKNCEQCLKVECDRDAYVQIRDGDL
VSGVIDKRAVGAFDGAILHRIIRQYGYARAAQFIDDVTRLSIRAIMHDGFTFGIDDEDLS
KSDYGQIREVLAQASEDVDRRIKIFEEGQLEPMPGRTPEETLEMQIMQVLGKARDNTGEI
AGRHLGLSNSAVVMAVSGARGSMLNLTQMAGCVGQQAVRGERIMRGYEDRTLPHFKKNER
GAMGHGFVMNSYKSGLNPTEFFFHAIGGREGLVDTAVRTSQSGYLQRRMINALQDLKVAY
DGSVRTTGGRIIQIEYGEDSTDPMKSSFGEPVDVEGIVGNILKEEI
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcccaaaacgaattggaaggattgagttcggtctcctctccccgaaagagatc
cgccagatgagtgtccgtaagatcatatgggcagacacctatgatgatgatgggtttccg
tatccacagggtcttatggatcttcaccttggtgtcatcgaccctggtcttcgatgtaag
acctgcagtcagaaggctggtgaatgtcctggccactttggtcacatcgaactcgctaaa
ccggtcatacacgtagggtacactcgtctgatcaggaaactgctcagggttacctgccgt
gaatgtggtcgcctccttctctcacctgaagagattgagaagatcatgggaccagaggat
gagagcagtggtgactctctctctgagaaagatgttaaaaaggagcgtatctgcccccac
tgtggagagcagcagcttaaaattaactttgaaaaaccaactacgttcgccgaagtcaca
accgatgatcgtggcaaaaaagttgagaacaaactgacacctgcagatatcagggcccga
cttgaaaaaatcccggacgaggatctgattcacctcggaattgagccttcggtggcacgg
ccggaatggaccatcctcaccgtgcttcctgttccaccggttacaatgcggccgtccatt
attctggaaaatggtcagcggtcagaggatgatctgactcacaaacttgtggatatcatc
cgtatcaaccagcgtttcaaagagaatcaggatgccggagcaccacaactgatcattgag
gatctgtgggaactgcttcaataccatgtcaccacgtacatggacaatgaagttgcagga
tgtccgcctgcacgtcaccggtcaggacggccactcaaaaccctctcccagcgtctcaaa
ggaaaagatggtcgttttcgtggaagtttgtctggaaagcgtgtcaacttttcatcacgt
actgtcatttccccaagtccgaacctttcggtcaacgaagtaggtattccactaaagatt
gccaacgagatgaccatccctgttcaggctactatatacaacatagatgagcttcgccag
atcgtcaaaatcggtcctgaaagaccctgggtgaagagtccgtgcggagccaactatgtt
atcaggcctgacaagcggcgtatccggcttgtgaaagggactggaacagaagacgggaac
cttgagtttgtttctgaacagattgaacccgggtggattgttgagcgtcaccttcgtgat
ggcgacattgtgctcttcaaccgtcagccgtcccttcaccggatgtccatcatggcccac
tgggtaaaactgatggatgggaagacattcagactcaaccctgcagtctgtccaccatat
aacgcagattttgatggtgatgagatgaacctgcacatcccgcagaccgaagaggcccgg
gcagaagcagcaatgcttgcaagtgtgcaggaaaatattctctctccacgtttcggtggt
ccgatcatcggtggaatccatgaccacatctctgggattttcctgctcactcatgagctc
aggtggtttaccaagagtgaggcgatcgatcttctcaaaaataacaatgttgatcgccta
ggaaaacctggcaaggtagagaatggagttaactactggagtaataagcaggtcttctcc
aggattctcccgagcgatatgaacatggtcttccaggcatcttcctgtaagaactgcgaa
caatgcctgaaagtagagtgtgaccgtgacgcatatgttcagatccgcgacggtgacctt
gtatctggtgttatcgataagcgtgccgtcggtgcattcgatggtgcaatccttcaccgg
atcatcaggcagtacggatatgcccgggcagcccagttcattgatgatgtaaccaggctc
tcaatccgtgcaatcatgcatgatgggtttacattcggcattgatgatgaagacctgtcc
aagagtgattatggtcagattcgtgaggtactggcccaggcttctgaagatgtggatcga
aggatcaagatcttcgaagagggtcagcttgagccaatgccaggccggactcctgaagaa
acccttgaaatgcagatcatgcaggtgcttggaaaggctcgtgataacactggtgagatt
gcaggtcgtcaccttggtctctcaaactcagcagtggtcatggctgtttctggggcccgt
ggttcgatgctcaacctgactcagatggcaggttgcgtcggacagcaggcagttcgtggt
gagcgaattatgcgagggtatgaggatcgtacccttccccatttcaagaagaatgaacgc
ggagcaatgggtcacgggtttgttatgaacagttacaagtccggacttaacccgactgaa
ttcttcttccatgcaatcggaggtcgtgaaggtcttgtggatactgcagtccgtacttca
cagtctggttatctccagcgacgtatgatcaacgcattgcaggatctcaaggttgcatac
gacgggtcagtccggacaaccggaggtcgtatcatccagatcgagtatggtgaagattca
accgacccgatgaaaagttcatttggtgagcctgtagatgtcgagggtatcgttggtaac
atcctcaaggaggagatctaa
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