KEGG   Macrotis lagotis (bilby): 141496250
Entry
141496250         CDS       T11097                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
mlao  Macrotis lagotis (bilby)
Pathway
mlao03013  Nucleocytoplasmic transport
mlao04141  Protein processing in endoplasmic reticulum
mlao04150  mTOR signaling pathway
mlao05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mlao00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    141496250 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    141496250 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    141496250 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    141496250 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlao03019]
    141496250 (SEC13)
   04131 Membrane trafficking [BR:mlao04131]
    141496250 (SEC13)
Messenger RNA biogenesis [BR:mlao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     141496250 (SEC13)
Membrane trafficking [BR:mlao04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    141496250 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    141496250 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    141496250 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WDR55 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_Vps41 Beta-prop_WDR41 NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 141496250
NCBI-ProteinID: XP_074054690
LinkDB
Position
8:143096528..143116925
AA seq 379 aa
MAPSPPRKRPRGAQDRMWLPGVLTAAPEVTRPGRRRREELPRPSPAPAAAAAAAVAAAMV
SVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQ
VAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLLLAC
GSSDGAISLLSYSGEGQWEVKKINNAHTIGCNAVSWAPAVIPGSLVDQPSGQKPNYIKKF
ASGGCDNLVKLWKEEEDGQWKEDQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI
WTCDDASGNTWSPRLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWMCISD
VNKGQGSVSSITEGQQNEQ
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggccccgtctcccccccggaaacgtccccgcggtgcacaagaccggatgtggctgccg
ggcgttctgacagcggcaccggaagtgacccgtcctgggcgccgccgccgggaggagctg
ccacgtccgagcccggcacccgccgccgccgctgccgccgccgtcgccgccgccatggtg
tcagtcattaacaccgtggatacctcccatgaggacatgattcatgatgctcagatggac
tattatggtacccgattggccacctgctcatcagatagatctgtcaaaatctttgatgta
cggaatgggggtcagattctcattgctgatctgaggggtcatgaaggccctgtgtggcaa
gtggcctgggctcatcctatgtatggaaacatcctggcctcctgctcctatgatcggaaa
gtcattatctggaaagaagaaaatggcacatgggaaaaaacttatgagtacacaggacat
gactcttcagtgaactcagtgtgctgggccccccacgactatgggctccttcttgcctgt
ggcagctccgacggggccatctccctgctaagctacagcggcgaggggcagtgggaagtg
aagaaaatcaacaatgcccacactattggctgcaatgccgtgagctgggctcctgcagtc
atacctgggagcctggtagaccagccgtctggacagaagccaaactacatcaagaagttt
gcctcaggtggctgcgacaacttggtcaagctatggaaggaggaggaggatggtcagtgg
aaggaggatcagaaactggaagctcacagtgactgggtccgagatgttgcctgggctcct
tcaattggcctcccaacaagcaccattgccagttgctctcaggatggtcgagtgttcatc
tggacctgcgatgatgcttctggaaacacatggtctcccagattactgcacaagttcaat
gacgttgtgtggcatgtgagctggtctatcacagccaacatcctggctgtttcaggagga
gacaacaaagttactctgtggaaggaatctgttgatggacagtggatgtgtatcagtgat
gtcaataaaggccaaggttcggtgtcttcaatcacagagggccaacagaatgagcagtga

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