Mammaliicoccus lentus: H3V22_02865
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Entry
H3V22_02865 CDS
T07021
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mlen
Mammaliicoccus lentus
Pathway
mlen02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mlen00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H3V22_02865 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlen03021
]
H3V22_02865 (rpoD)
Transcription machinery [BR:
mlen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H3V22_02865 (rpoD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
QMU11182
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All DBs
Position
complement(573816..574925)
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AA seq
369 aa
AA seq
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MSDKELNKINSANNEAVLTIEQVKHQLIEQGKKAGHLSHEEIADKLQNYEMDSDQMDDFF
DLINENEINLINEKDSTDTDDKLSLNDLSAPPGVKINDPVRMYLKEIGRVNLLTAQEEIE
LAKRIEKGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFNK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPSPEEI
GEEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDAQSPSDHAAYELLKEQ
LEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSR
SKRLKDFMD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaagaattaaataaaatcaatagcgctaacaatgaagcagttttaacaatt
gaacaagttaagcatcaattaattgaacaaggtaaaaaagctggacatttaagtcatgaa
gaaattgctgataaattgcaaaattatgaaatggattcagatcaaatggatgatttcttt
gatttgatcaatgaaaatgaaatcaatcttattaacgaaaaagattctactgatactgat
gataaattaagtttaaatgacttaagtgctcctccaggtgtaaaaataaatgacccagta
agaatgtacttaaaagaaataggacgtgtaaatctattaacagcacaagaagaaattgaa
ttagctaaaagaatagaaaaaggcgatgaagtagcgaagtctcgtttagctgaagcgaac
ttaagacttgtagtaagtatagctaaacgttacgttggtagaggtatgttattcctagac
cttattcaagaaggtaacatgggtcttattaaagctgtagaaaaattcgactttaacaaa
ggattcaagttctcaacttatgctacatggtggattcgtcaagctatcactagagctata
gctgaccaagcacgtactatacgtattccagtacacatggtagaaacgattaataaatta
attcgtgttcaaagacaattattacaagatttaggtagagatccatcaccagaagaaatt
ggtgaagaaatggatttaccaccagaaaaagtacgcgaaatcttgaaaattgctcaagaa
ccagtgtcacttgaaacgcctattggtgaagaagatgacagtcatttaggtgactttata
gaagatcaagatgcacaaagtccttctgaccacgctgcttatgaattattaaaagagcaa
ttagaggatgttttagacacattaacggatagagaagaaaatgtattaagattacgtttt
ggtcttgatgacggtcgtacacgtactttagaagaagtaggaaaagtatttggtgtaaca
agagaacgtattagacaaatcgaagcaaaagctttacgcaaattaagacacccatcaaga
agtaaacgcttgaaagattttatggactaa
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