Mammaliicoccus lentus: H3V22_10260
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Entry
H3V22_10260 CDS
T07021
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mlen
Mammaliicoccus lentus
Pathway
mlen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mlen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H3V22_10260 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlen03021
]
H3V22_10260 (rpoB)
03400 DNA repair and recombination proteins [BR:
mlen03400
]
H3V22_10260 (rpoB)
Enzymes [BR:
mlen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H3V22_10260 (rpoB)
Transcription machinery [BR:
mlen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H3V22_10260 (rpoB)
DNA repair and recombination proteins [BR:
mlen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H3V22_10260 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
WHD_GTF3C1
ATP-grasp_6
TBCA
Motif
Other DBs
NCBI-ProteinID:
QMU09966
LinkDB
All DBs
Position
2044442..2047996
Genome browser
AA seq
1184 aa
AA seq
DB search
MTGQLIQYGRHRVRRSYARISESLELPNLIEIQTKSYEWFLKEGLLEMFRDISPIDDFTG
NLSLEFVDYRLGESKYDLEESKNRDATYSAPLRVKVRLINKETGEVKDQEVFMGDFPLMT
DTGTFVINGAERVIVSQLVRSPSVYFNEKVDKNGKISYGTTVIPNRGAWLEYETDAKDVP
YVRIDRTRKLPITVLVRALGFSTDQEILDLLGDNEYLRNALDKDNTETTDQALLEIYERL
RPGEPPTVENAKSLIYSRFFDPKRYDLASVGRYKMNKKLHLKHRLFNQTLAEPIVDVETG
EIAAEEGTVLDRRNLDKIIDVLESNANIQVYELNSSVLDEPVEIQSVKIYIPGDEENRTT
TVIGNAFPDEAVKCITPADIVSSLSYFFNLLHGVGYTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTDSITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELT
NKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLMNSLSSYARVNEFG
FIETPYRKVNIETNQVTDRIDYLTADEEDSYVVAQANSVLDETGRFVDDEVLCRFRGDNT
TKPKERMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPEAPFVGTG
MEHVTARDSGAAIVAKYKGRVEHVESKEILVRRIVEENGKEIETELDRYPLSKFKRSNSG
TCYNQRPIVAYGDIVSKGEILADGPSMELGEMALGRNLVVGFMTWDGYNYEDAVIMSERL
VKDDVYTSIHVEEYESEARDTKLGPEEITRDIPNVSDNALKNLDDRGIVYVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDS
LSPGVNQLVRVYIVQKRKIHEGDKMCGRHGNKGVISRILPEEDMPYLPDGTPIDLMLNPL
GVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGANDDDVWSTIEEAGMARDGKTVLYDG
RTGEPFDNRVSVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDTVGRVKTYEAIVKGDNIPKPGVPESFRVLMKELQSLGL
DVKVMDEHDNEIEMRDLEDEDMMDKKVDLGVSQDAAVEGQQVTE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaacttatccagtatggaagacatcgtgttcgtagaagttatgcgagaatt
tccgaatctttagaattacctaatttaatcgagattcaaacgaaatcatatgaatggttt
cttaaagaaggtttacttgaaatgtttcgcgacatttcgccaatcgacgattttacaggt
aacttatctttagaattcgtagattatcgtttaggtgaatcaaagtatgatttagaagaa
tctaaaaaccgtgatgcgacttattccgcgccattacgcgttaaagttcgtttaattaat
aaagaaacaggcgaagtgaaagatcaagaagtatttatgggtgatttcccattaatgact
gacactggtactttcgttattaatggtgcagaacgtgtaattgtatcacaacttgtacgt
tcaccatccgtatacttcaacgaaaaagttgataaaaacggtaaaattagttatggaaca
actgtgattcctaaccgtggtgcatggttagaatatgaaacagacgctaaagacgttcct
tacgtaagaattgatagaacgcgtaagttgccaattacagtattagtccgcgctttagga
ttctcaacggaccaagaaattttagatttacttggagacaatgaatatcttagaaacgct
ttagataaggataatactgaaactactgatcaagcattgcttgagatttatgagcgtttg
cgtccgggagaaccaccaacagtagaaaacgcgaagagtttaatttactcacgcttcttc
gacccaaaacgttatgatctagcgagtgtcggtcgttataaaatgaacaaaaagttacat
cttaaacatcgtttgttcaatcaaacattagctgaacctattgttgatgttgaaacaggt
gaaattgcagcagaagaaggaacggttttagaccgtcgtaatttagataaaattatcgat
gtattagaatctaatgctaacattcaagtttatgaattaaatagtagcgtattagatgaa
ccagttgaaattcaatctgttaagatttatatccctggtgatgaagaaaaccgtacgaca
acagtgattggtaatgcatttcctgatgaagcagttaaatgtattacgccagcagatatc
gtttcatcattatcatatttcttcaacttattacatggtgtaggttatacagatgacatt
gaccatttaggtaaccgtcgtctacgttcagtaggtgaattgctacaaaaccaatttaga
attggtttatcacgtatggaacgtgttgtacgtgaacgtatgtcaattcaagatactgat
tcaatcacaccacaacaacttataaatatacgtccagttattgcttcaattaaagaattc
tttggtagttcacaattgtctcaattcatggaccaagctaacccattagctgagttaacg
aataaacgtcgtctatcagcgcttggacccggcggtttaactcgtgaacgtgctggtatg
gaagtacgtgacgttcactattctcactatggtcgtatgtgtccgattgagacaccagag
ggaccaaacattggtttaatgaactcactttcaagttatgctagagttaacgagtttggc
tttattgaaacaccatatcgtaaagttaatatcgaaactaaccaagtaacagacagaatt
gattatctaactgctgatgaagaagatagttatgttgttgcacaagcaaactcagtatta
gatgaaactggtagattcgtcgacgatgaagttctttgtcgtttccgtggtgacaacact
actaaacctaaagaacgtatggattacatggatgtatctcctaaacaagttgtttctgca
gcaacagcatgtattcctttccttgaaaacgatgactctaaccgtgcacttatgggtgcg
aacatgcaacgtcaagcagtacctttaatgaaccctgaagcaccatttgttggaacgggt
atggaacatgttacagcacgtgactcaggagcagctattgttgctaaatataaaggtaga
gttgaacatgttgaatcgaaagaaattcttgttagaagaattgtagaagaaaatggtaaa
gaaatcgaaacggaattagaccgttatcctttatctaaatttaaacgtagtaactctgga
acatgttataaccaacgtccaatcgttgcatatggtgacattgtttctaaaggtgaaatt
ttagctgatggaccttcaatggaacttggtgaaatggcactaggtagaaacttagtagtt
ggatttatgacttgggatggttataactacgaggatgctgttatcatgagtgaacgtctt
gttaaagatgacgtatatacttctattcatgttgaagaatatgaatcagaggctcgtgac
actaaattaggacctgaagaaatcacacgtgatattccaaacgtttctgataatgcactt
aaaaacttagacgatcgcggtattgtttatgttggtgctgaagttaaagatggtgacatt
ttagtaggtaaagtaacgcctaaaggtgtgactgaactaacagctgaagaaagattatta
catgcgatatttggtgagaaagcacgtgaagtacgtgatacatcattacgcgtacctcat
ggtgcgggaggtatcgtattagacgttaaagtctttaatagagaagaaggcgatgattca
ttatctccaggtgttaaccaattagttcgtgtttatatcgttcaaaaacgtaaaatacat
gaaggggataaaatgtgtggtcgtcatggtaacaaaggtgtaatttcacgtattttacct
gaagaagatatgccttacttaccagatggaacaccaattgaccttatgttaaacccatta
ggtgtaccttctcgtatgaatatcggacaagttttagaacttcatctaggtatggcagct
aagaatctaggtattcatgttgcttcaccagtatttgatggtgctaacgatgatgatgtt
tggtcaactattgaagaagcaggtatggctcgtgacggtaaaactgtcttatacgatggt
cgtactggtgaaccatttgataaccgtgtatctgtaggtgttatgtacatgcttaaactt
gcacacatggtcgatgataaattacacgcacgttctactggtccatactcacttgtaacg
caacaaccattgggtggtaaagctcaattcggtggacaacgtttcggtgaaatggaggta
tgggcacttgaagcatatggtgctgcgtacacattacaagagattttaacttataaatct
gatgatactgtaggtcgtgtaaaaacttatgaagctatcgtaaaaggcgacaatatccct
aaaccgggtgtccctgaatcattccgcgtattaatgaaagaattacagagtttaggactt
gatgttaaagtcatggacgaacatgataatgaaatcgaaatgcgcgatttagaggatgaa
gatatgatggataaaaaagttgatttaggtgtttcacaagatgcagcagtagaaggacaa
caagtaactgagtaa
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integrated database retrieval system
