Myotis lucifugus (little brown bat): 102421437
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Entry
102421437 CDS
T07795
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102421437 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlf03019
]
102421437 (PNLDC1)
Enzymes [BR:
mlf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
102421437 (PNLDC1)
Messenger RNA biogenesis [BR:
mlf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102421437 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
102421437
NCBI-ProteinID:
XP_023600757
Ensembl:
ENSMLUG00000000747
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MDVGADEFEQSLPLLQELVQGADFLGEVRGFRASLNLNYLGRYIVINLIRVLLRLRKSHT
QGAKEPHVALEPQFPTTELGHGTLVFFAFPAGLDIEFTGLRTNLSGSQQISLFDLPSEWY
LKTRRSVQQFTICQIGLSVFSSVAGESNKYVAHSCNFFLFPTTFGILDSEFSFQASSVQF
LNQYGFDYNKFLKHGIPYMNEEQEKQIKHNILTGNWRVRSSLDKDQMKAVIDEVTRWLHL
AEEGDWMTLPGITGFQAFEVQLVLRQALPDIWTVLRDQAVIVKKVSRQHRWYLQNTSCDR
ESCWKEKILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYHQFKQNI
HSLFPVLLDTKNVTKDIWKDLNFPRVSNLSEVYEVLNSELNPTKDSGPVIIHASKCERYA
ETKFPHEAAYDAFLCGSVLLKVAHLLLWRVHGAGPTPEPSFPLYLDVLAPYVNQVNLIRA
GVPKINFSGPDYPSIRPPILVLSVRRWLGVTEQQIYREFQSLCKFDVRRLTRNQFLLLTN
KFKDARSVLKEYRGHPALQVSLYRYWRHSPDVHCLLQVCGIVTAWALLAFLLGRPGP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgcggacgagttcgagcagagcctccctctgctgcaggagctggtccag
ggcgcggacttcctgggtgaggtccgggggttccgggccagtttaaacttaaactattta
ggtaggtacattgttattaacttaattagggtactcctaaggcttaggaagagccacact
caaggggccaaagagccgcatgtggctctcgagccgcagtttccgaccacggagctaggg
catgggactcttgtcttttttgccttcccggcaggtctggacatagagttcacgggcctt
cgcactaacctgtccgggtcccagcagatcagtctttttgacttgccatcggagtggtac
ctaaagacccgtcggagtgttcagcaatttacaatctgtcagattggactgtctgtgttt
tccagcgtcgcaggcgagtcgaacaagtacgtagcccattcctgtaacttctttctcttc
cctacgacgtttgggattctggactcggaattctctttccaggcctctagcgtacagttt
ctgaatcagtatggcttcgactataacaagtttctcaaacatggaatcccctacatgaac
gaagagcaggagaagcaaatcaaacacaacatcctgactgggaactggagagtccgcagt
tccctggacaaagatcaaatgaaggcggtgatcgatgaggtgacgcggtggctgcacctg
gcggaggaaggcgactggatgacgctccctgggatcactggcttccaggccttcgaggtc
cagctggtgctgaggcaggccctcccggacatctggacggtgctgagagaccaggcggtg
atagtgaagaaagtgagcaggcagcaccgctggtacctccagaacacgtcctgcgaccga
gagagctgctggaaggagaagatcctgctctccgccaggggcttctctgtgtttttccag
atgctggtgaaagcccagaagcccttggtgggacataacatgatgatggacctgctgcat
ctgcatgagaagttcttcaggcccctcccagaaagctaccaccagttcaagcagaatatc
cacagcctctttcccgtcctcctcgacaccaagaatgtgaccaaggacatatggaaggac
ctgaatttcccgagggtttccaatctctccgaggtgtacgaagtcctgaacagtgagttg
aatcccaccaaggactctgggccagtgatcattcacgccagcaagtgcgagagatacgct
gagacaaagttcccccacgaagcagcatacgacgccttcctctgcggatcagttcttctg
aaagtggcgcacttgctcctgtggagagtgcacggggccggccccaccccggagccctcc
ttccccctgtacctggacgtgctggccccctatgtgaaccaggtgaacctgatccgcgcc
ggggtccccaagatcaacttctctggcccagattatcccagtatccggccccccatcctc
gtcctcagcgtccggaggtggctgggggtcaccgagcagcagatctatcgcgagttccag
agtctctgcaaattcgacgtccggcgactcacgcggaaccagttcctgctcttgaccaac
aagttcaaggacgcccggagcgtcctgaaggagtaccggggccaccccgcgctgcaggtg
tcgctgtaccggtactggaggcactccccggacgtccactgcctgctgcaagtctgtggc
atagtcaccgcctgggcccttctcgcgtttctcctggggcgacctggcccctga
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