Myotis lucifugus (little brown bat): 102422560
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Entry
102422560 CDS
T07795
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mlf
Myotis lucifugus (little brown bat)
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlf03009
]
102422560 (IGHMBP2)
03012 Translation factors [BR:
mlf03012
]
102422560 (IGHMBP2)
Enzymes [BR:
mlf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102422560 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
102422560 (IGHMBP2)
Ribosome biogenesis [BR:
mlf03009
]
Eukaryotic type
Other ribosome biogenesis factors
102422560 (IGHMBP2)
Translation factors [BR:
mlf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102422560 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
DEAD
AAA_16
nSTAND3
ResIII
AAA_22
UvrD-helicase
NAT10_TcmA_helicase
AAA_25
Zot
IstB_IS21
ATPase
PhoH
nSTAND_NTPase5
VWA_2
SLFN-g3_helicase
Herpes_ori_bp
AAA
UvrD_C_2
Flavi_DEAD
ABC_tran
DUF7205
AAA_7
NTPase_1
Motif
Other DBs
NCBI-GeneID:
102422560
NCBI-ProteinID:
XP_006107153
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MASAAVETFVAKQLDLLELERDAEVEERRSWQENVSLKELQRRGVCLLKLQVSSQRTGLY
GQLLVTFEPPRCASAGVLPSNSFSSGDIVGLNDEGGQLATGVLTRITQKSVTVAFDQSCD
SQLSFDQQNSYRLLKLANDVTYKRLKKALIALKKYHAGPALSLIEVLFGGAAPSPAGDTR
PPTFYNAALDASQQEAVSFALAQKELAIIHGPPGTGKTTTVVEFILQAVKQGCKVLCCAP
SNIAVDNLVERLARSGRRALRLGHPARLLESIQQHSLDAVLARSDGAQIVADIRRDIDQV
SVKIRKTQDKREKSTFQNEIRLLRKELKAREEAAMLESLRAADVVLATNTGASPDGPLKL
LPDGYFDVVVIDECAQALEASCWVPLLKARKCVLAGDHKQLPPTIVSPKAALAGLSLSLM
ERLAQGCCAGAVRTLTVQYRMHRAIMQWASEALYRGQLTAHPSVAEHLLRDLPGVAATEE
TGLPLLLVDTAGCGLSELEEEEDQSKGNPGEVRLVSLHVQALVDAGVRASDIAVITPYNL
QVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAIVCDSRTVSNHAFLKTLVDYFTEHGEVRTAFEYLDDIVPENYSYESSQGHGQAG
AKPQGSAGSARKPGGRRPEGAREARATARLVQKAPPGKPLGSEAQSQPSLNGGSPGGPGS
RDSADHFRALIAEFVASEQVQLEFPASLNSHDRMRVHQIAEEHGLRHDSSGEGKHRFITV
SKRAPPAPPATPAPSAPPVPPVPPVPAGTDSKAPLHPEPPSPVQTEPPGREPSSVDLRAV
HLERLQRERARQEQRAKEGTRAAGPGLRKLPEKKKKKDAKGPAALDLPSTEDFDALVLAA
MKADNTCGLAKCRASVVTLGQLCPHCNRRYCLSHCLPEIHGCGERARAHARQRISREGVL
YAGSGTKDRSLDPAKRAQLQRSLDKKLGELSSQRRSKRREKEM
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggccgtggaaaccttcgtggccaagcagttggacctgctggagctggag
agggacgcggaggtggaggagcgcaggtcctggcaggaaaacgtctctctgaaggagctc
cagcgccgcggcgtctgtctgctgaagctgcaggtgtccagccagcggaccgggctgtac
ggacagctgctggtcaccttcgagcccccgagatgcgcgtctgcaggagtgcttcccagt
aacagcttttcctccggtgatattgtgggtctgaatgatgaaggaggtcagctggccact
ggggtgctgacccggatcacccagaaatcggtcacagtggcctttgaccagtcctgtgat
tcccagttgagcttcgaccaacagaattcctaccgactgttaaaacttgccaatgatgtc
acttacaagcgcctgaagaaagccctgatcgccctgaagaagtaccacgccggccccgcg
ctctcgctcatagaggtcctcttcggcggcgcagcccccagtcctgccggcgacacacgg
ccgccgaccttctacaacgccgccctggacgcctcccagcaggaagcggtttcgtttgcg
ctggcccagaaagaactggccatcatccacgggcctcctggcaccgggaagaccaccact
gtggtggagttcatcctccaggcggtgaagcagggctgcaaggttctgtgctgcgcgccc
tccaacatcgccgtggacaacctggtggagcgcctggcgcgaagcgggcggcgggcgctg
cgcctcgggcaccctgcccggctcctggagtccatccagcagcactcgctggacgcggtg
ttggcgcgcagcgacggcgcccagatcgtggccgacatccggagggacatcgaccaggtc
tccgtgaaaattagaaagacccaggacaagagagagaaaagtacttttcaaaatgaaatc
aggctgctgaggaaggagctgaaggcgagggaagaagccgcgatgctggaaagcctccgg
gcggccgacgtggtcctggccacaaacacaggcgcttctcccgacgggcccctgaagctg
ctgcccgacggctacttcgacgtggtggtcatcgacgagtgcgcccaggccctggaagcc
agctgctgggtccccctgctgaaggccaggaagtgcgtcctggccggggaccacaagcag
ctgcctcccaccatcgtctctcccaaagctgcgctagcgggactgtcgctgagcctgatg
gagcgcctggcccaggggtgctgcgcgggggcagtgcggacgctgacggtgcagtaccgc
atgcaccgggccatcatgcagtgggcctcggaggccctgtaccgcgggcagctcacggca
cacccttctgtggcagagcacctcctgcgggacctcccgggagtggctgccacggaggag
acgggcctccccctgctgctcgtggacacggccggctgcgggctgtccgagctggaggag
gaggaggaccagtctaaagggaaccccggggaggtgcgcctcgtcagcctgcacgtccag
gctctggtggacgccggcgtccgggcgagcgacatcgccgtcatcacgccatacaacctc
caggtggacctgctcagacagagccttgctcacaggcaccctgagcttgaaatcaagtcg
gtcgacggcttccaaggccgagagaaggaggcggtggtgctgtccttcgtcagatccaac
aggaaaggtgaagttggtttccttgccgaggaccggcggatcaacgtcgccgtcacccgc
gctcggcgccacgtggccatcgtctgcgactctcgcacggtcagcaaccacgccttcctg
aagaccctggtggattacttcacggagcacggggaggtgcgcacggcctttgagtatctt
gatgacattgtccctgaaaactattcctacgagagttcccagggccacggccaggccggt
gcgaagccccaaggctcagccgggtccgccaggaagcctggaggccggcggcccgaggga
gctcgggaggccagagcgaccgccaggctggtccagaaggcgccgcccgggaagcccttg
ggctctgaggcccagtctcagcccagcctcaacggaggcagcccaggggggccggggagc
agggacagtgcggaccacttccgggccctgatcgccgagtttgtggccagtgagcaagtg
cagctggagttccctgcttccctgaactcacacgacaggatgcgcgtccaccagatagcg
gaagagcacgggctgaggcacgacagctccggggaagggaagcacaggttcatcaccgtg
agcaagagggccccgccggccccgccggccacaccggccccgtcggctccaccagtcccg
cctgtcccacccgtcccggcagggactgacagcaaagcccctctccatcctgagcccccc
agccccgtgcagacggagccccccgggcgagagccgagcagcgtggacctgagggccgtg
cacctggagcgactgcagagggagagggccaggcaggagcagcgagccaaggagggcaca
cgggccgcgggcccggggctgcggaagttaccagaaaagaaaaagaagaaagatgcaaaa
ggacctgcggccctggatctgccctccacggaggacttcgacgccctggtcttggccgcc
atgaaggctgataacacttgtggcctcgccaagtgccgggccagcgtcgtgactctgggc
cagctctgcccacactgcaaccgccgctactgcctcagccactgcctgcccgagatccat
ggctgtggggagagggcccgcgcccacgcccggcagagaatcagccgggagggagtgctg
tacgccggcagtgggaccaaggaccggtccctggaccccgccaagagggcccagctgcag
aggagcctggataagaagctgggcgagctgagcagccagaggaggagcaaaaggagggag
aaggagatgtga
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