Myotis lucifugus (little brown bat): 102423616
Help
Entry
102423616 CDS
T07795
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X5
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102423616 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlf03019
]
102423616 (CNOT1)
Messenger RNA biogenesis [BR:
mlf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102423616 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102423616 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
102423616
NCBI-ProteinID:
XP_006099278
Ensembl:
ENSMLUG00000003728
UniProt:
G1P0U8
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAGQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPALNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMDVFPVDLIYRPWKNAEGQLSFIQHSLINPEIFC
FADYPCHTVVIDILKAPPEDDNREIATWKSLDLVESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVMALLQINSSWHSLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEHYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPTKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLTETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLSPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPALAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgcgccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcttcg
ctgattacaaagccaaattttatctctacgttgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctaagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagctcccagaccttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtg
ctacacctcctcctctcccatctcctctttgggcagaagggagccttcggagttggacag
gagcagatagacgcttttcttaagacactgcgcagagattttccccaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggttacagctggccaggtagcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggaattccattgcagagtatctctgctcctggcagtgggatt
tggagtgatggaaaagataaaagtgatggtgcacaggcacacacatggaatgtagaagtc
ttgattgatgttctcaaagagctgaacccggctttgaatttcaaggaagtaacttatgaa
ctggatcatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcaaaggggtttgggtatggatgtgttcccagtagacctcatatatagaccttggaaa
aacgcagaaggccagctctcctttattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgtcattgatattctgaaagcaccaccggaggat
gacaatcgagaaattgccacttggaagagcttggatttggttgaatctctactgaggctc
gcagaggtgggacaatatgagcaagtcaaacagctctttagcttccctatcaaacactgt
ccagacatgctggtaatggccttactacaaatcaacagctcctggcacagcttgcgccat
gaactcatctctactctgatgccaattttccttggaaaccatcctaactcagctattatt
ttgcactatgcatggcatgggcagggacagtctccctctatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggagagcattatgaccaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaggcatgcatgactttttta
aagaggcggtgtccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccggaaactctggcaacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggaattatcagaaaccatcctcaccatggtagccaattgcagcaatgtc
atgaataaggccagacaaccgccacctggagttatgccaaaaggacgccctcccagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttctactcca
aatcaaacaactgcattcagtggtatcggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggcgcttggactccctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagaggtttaaagactctacc
ataaagagggaacgagaagtatttaattgtatgctaaggaacttgtttgaagaatatcgt
tttttcccccagtaccctgataaagagttacatataacagcctgcctgtttggtgggata
attgaaaaaggactggtcacttatatggcactaggcctggccctgcgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattattttgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatacaatttccacatcatttacaggagtatatcgagtatggacagcaatcgagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttcccacaaaagcacctcttgctgggcaggttagcactatggta
accacctcaacaaccactactgttgcaaaaacggttacagtcaccaggcctaccggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacattgcttgtg
gccacagatcaaactgaaagaattgtagagccccctgaaaatatccaagagaaaattgct
tttatcttcaacaatctctcacagtcgaatatgacacaaaaggttgaagaactaaaggaa
acagtgaaggaagaattcatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattcaaacttccttgacacactgaagaatcctgaa
tttaataagatggttctaactgagacctacagaaacatcaaagtgctcttgacctctgat
aaagctgcagccaatttttcagatcgttctttgctgaagaacttgggacactggctagga
atgatcacactagctaaaaataaacccatcttacatactgacttggatgtcaaatctttg
ctgctagaggcttatgttaaaggacagcaagaattgctctatgtggtgcccttcgttgcc
aaagttttagagtctagcattcgtagcgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacatcaggaacacgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaacgagctaaaacctgga
aacctcctaaaggataaagatcgcctaaagaacttagatgagcagctctctgctccaaag
aaagatgtcaagcagccagaagaacttcctcccatcacaaccacaacaacttctacaaca
ccagctactagtaccacctgcacagccactgttccaccacagccacagtacagctatcat
gacatcaatgtctattcccttgcaggcctgtcaccacatattactctaaacccaacaatt
cccttgtttcaggcccatccacagttgaagcagtgtgtgcgccaagcaattgaacgggct
gttcaggagttggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gaacaaatagtcaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacctgcagggaacct
ttgctcatgagtatatccaccaacctgaaaaacagttttgcctcagcccttcgtactgca
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtggaaaaagcaggccctgagatggac
aaaagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacataccaagctgagcggatgccagaacaaataagactgaaa
gttggtggtgtggacccaaagcagttggctgtttatgaagaatttgcacgcaatgtgcct
ggtttcttgcctacgaatgatttaagtcagcccacaggatttttagctcaacccatgaag
caagcttgggcaacggatgatgtagctcaaatttatgacaagtgcattacagaactagag
cagcacctacatgccatcccaccagctttggccatgaaccctcaagctcaggctcttaga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttgctccagaaggctgtagagggcttactagatgccacaagtggtgctgatgctgacttg
ctgctgcgctacagggaatgccacctcttggtcttgaaggctcttcaagatggccgggcg
tatgggtcgccgtggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggcagtggagctgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaactacatggctgttgca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgcccatattact
gaggctgatctgttccacaccattgaaaccctcatgagaattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacagatgcatcagcaaggaatcctgaagactgatgacctcataacaaggttcttccgt
ctctgcactgaaatgtgtgttgaaatcagttaccgtgcccaggcagagcagcagcacaac
cctgctgctaatcccaccatgatccgagccaagtgctatcacaacctggatgcctttgtc
cgactcattgccctgttagtgaagcactcaggggaggccaccaacactgtcacaaagatt
aacctgctgaacaaggtccttggtatagtagtgggagttctcctacaggatcatgatgtc
cggcaaagtgaatttcagcagcttccctaccatcgcatttttatcatgctgctcttggaa
ctcaatgcacctgaacatgtattggaaaccattaatttccagacacttacagctttctgc
aatacattccacatcttgaggcctaccaaagctcctggctttgtgtatgcgtggcttgaa
ttgatctcccatcggatatttattgcaagaatgctggcacatacgccacagcagaaggga
tggcctatgtatgcacagctactgattgatttattcaaatatttagcacctttccttaga
aatgtggaactcaccaaacctatgcaaatcctctacaagggcactttaagagtgctgctg
gttcttctgcatgatttcccggagttcctttgtgattaccattatggattctgtgatgtg
atcccacccaattgtattcagctaagaaacctgatcctgagtgccttcccaagaaacatg
aggctcccagacccattcactcctaatctgaaggtggatatgttgagtgaaattaacatc
gcaccccggattctcaccaattttactggagtgatgccacctcagttcaaaaaggatttg
gattcctatcttaaaactcggtcaccagtcacttttctatctgatctgcgcagcaaccta
caggtatcaaatgagcctggcaatcgctataacctacagctcatcaatgcactggtgctc
tatgtcgggactcaggccattgcacacatccacaacaagggcagcacaccctcaatgagc
accatcacccactcggctcacatggacatattccagaacctggctgtagacttggacact
gaaggtcggtatctcttcttaaatgcaattgcaaaccagctgcggtacccaaatagccac
actcactacttcagctgcaccatgctgtacctttttgcagaggccaacactgaagctatc
caagaacagatcacaagggttctcttggaacggttgattgtaaataggccacatccttgg
ggtctacttattaccttcattgagctgattaaaaatccagcatttaagttctggaaccat
gaatttgtacactgtgccccagaaattgaaaagttattccagtccgttgcacagtgctgc
atgggacagaagcaggctcagcaagtaatggaagggacaggtgccagttag
DBGET
integrated database retrieval system
