Melampsora larici-populina: MELLADRAFT_113458
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Entry
MELLADRAFT_113458 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
mlr
Melampsora larici-populina
Pathway
mlr03018
RNA degradation
mlr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MELLADRAFT_113458
09123 Folding, sorting and degradation
03018 RNA degradation
MELLADRAFT_113458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_113458
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_113458
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MELLADRAFT_113458
mRNA degradation factors
5'-3' decay
Lsm complex
MELLADRAFT_113458
Spliceosome [BR:
mlr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MELLADRAFT_113458
Complex C
U2 snRNP components
MELLADRAFT_113458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
18924990
NCBI-ProteinID:
XP_007418203
JGI:
Mellp1_113458
UniProt:
F4S9X6
LinkDB
All DBs
Position
Unknown
AA seq
161 aa
AA seq
DB search
MNLILALFLIDFESLNLLTFFQNVFKTLTGQEVTIELKNDLAIQGTLASVDQFLNLKLEN
IKVLDQERYPHMMAVKNCFIRGSVVRYVQIPKNAVDTQLLEDATRKVLQLQMRISLDEEG
KKQFALGIKLMETFEWTADNKKYKMDYAEAFNNVDEEVNMD
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgatcttggctttattcttgatcgactttgaatctctaaaccttttaactttt
ttccaaaatgtttttaaaactcttacgggtcaagaagttactattgaattgaaaaatgat
ttagctattcaaggaactttagcaagtgttgatcagtttcttaatcttaaacttgaaaat
ataaaagttttagatcaagaaaggtaccctcatatgatggcagtgaagaattgtttcata
cgtggatcggtagtaagatacgtacaaattccaaaaaatgcagttgatactcaattacta
gaagatgctactcgtaaagtattacaattacagatgagaatcagtttagatgaagaaggg
aagaaacaatttgcattgggtatcaaattgatggaaacattcgagtggacagctgacaac
aaaaagtacaagatggattacgcagaggcctttaataatgtagacgaagaagtcaacatg
gattga
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integrated database retrieval system
