Mirounga leonina (Southern elephant seal): 118016736
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Entry
118016736 CDS
T07472
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlx04515
]
118016736
Cell adhesion molecules [BR:
mlx04515
]
Cadherins
Protocadherins
118016736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
118016736
NCBI-ProteinID:
XP_034870218
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MMGTGKRFFPLGSDIMEMARTKVHRKKRQVAILIIWVLLWEAGSESIQYSVLEESETGTF
VANLTKDLGLRRGELAARGAQVVFKGNRQYLQLDPKTYDLLLNEKLDREELCGSTEPCVL
PFQVLLENPLQFFQAALRVRDINDHAPEFPAREMLLKISEITTPGKLFPLKMAQDLDAGN
NSLQSYIISSNPHFHVLTRNRSDGRKFPELVLDKALDREEQRELRLTLTALDGGSPPRSG
STEIQILVLDINDNAPEFAQELYEAQIPENNSLGSLIITVSATDLDAGSFGEVSYALFQG
DDVNQPFEINAITGEIRLRKTLDFEEFQSYHVDIEATDGGGLSGKCSLVIKVLDVNDNAP
QLTMSSLVSPIPENLPEVIVAVFSVSDADSGQNQQVICSIDDNLPFLLRPSVENFYTLVT
EGALDRESQAEYNITITVTDLGTPRLQTQHHMTVTVSDVNDNAPAFSHTAYTLRVRENNS
PGLHIGRVSAADRDAGANAQVTYSLLPPHDPRLPLASLVSLHAATGQLFALSSLDFEALR
AFEFRVGAADRGSPALSSQALVRVLVGDANDNAPFVLYPPQNGSARCPELVPRAAEAGYL
VTKVVAVDGDSGQNAWLAYQLLRATEPGLFGVWAHNGEVRTARPLSARDAVRHRLLVLVK
DNGEPPLSASVTLHVLLVDGFSQPYLPLPAAAAAEARADPLTVHLVVALASVSSLLLVAV
LGFVAVRLGRRSRAAAGGGCSLPEGPFAGHLRDVSGAGTLSHSYQYEVCLTGGSGTGEFK
FLKPIFPSILSQDLRNKSEGNPTFRNSKNVENLTEEKYYEHKKCGTIFNCPSSFRRV
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgatggggactggaaaaagattttttcctctgggatcagacataatggagatggcgaga
acaaaagtacatcgcaagaaaaggcaagtggcaattctcattatatgggtgcttttgtgg
gaagccggttcagaatcgattcaatattctgtactggaggagtcagaaactggcacgttt
gtggccaatttgacaaaggacctgggactcaggagaggagaactggctgcgcgtggtgcc
caggttgttttcaaggggaacagacagtatttgcagcttgacccaaagacctatgattta
ctgctaaatgagaaactggaccgggaagagctgtgcggctccactgagccatgcgtgcta
ccttttcaagtgttactggaaaatcccttgcagttttttcaggctgctttacgagtcaga
gatataaatgaccacgccccagagttcccagccagagaaatgctactaaaaatatcagaa
attactacaccaggaaagctatttcctttgaaaatggcacaggatttagacgctggtaac
aacagtcttcagagctatataatcagctccaatcctcattttcacgttctcactcgcaat
cgcagcgatggcaggaagttcccggagctggtgctggacaaagccttggaccgcgaggag
cagcgcgaactaaggcttaccctcacagcgctggatggtgggtctccgcccaggtctggg
agcacggagattcagatcctggtcttggacatcaatgacaatgctcccgaatttgctcag
gaactctatgaggcacaaatccctgaaaacaattccctaggctccctgattatcaccgtc
tcagcgacagatttagatgcaggatcctttggggaggtatcttatgccctatttcaggga
gatgacgttaatcaacccttcgaaataaacgcaattacaggagaaattcgactgagaaag
actttggattttgaggaatttcaatcataccacgtggatattgaggctacagatggcggg
ggactatcaggaaaatgctctttagtcatcaaggttctggacgtaaatgacaacgctcct
caactgaccatgtcctccctcgtcagtcccatccccgaaaacctgccagaggtcatagta
gcagttttcagtgtgtcagatgcagattctggacaaaatcaacaggttatttgttctata
gatgacaatctcccctttcttctaagaccatcagtcgagaatttctacaccttggtaact
gaaggagcgctggaccgagagagccaggccgagtacaacatcaccatcaccgtcactgac
ctgggcacccccaggctgcaaacccagcaccacatgacggtgacggtgtccgacgtgaac
gacaacgcgccggccttcagccacaccgcctacaccctgcgggtgcgcgagaacaacagc
cccggcctgcacatcggccgcgtgagcgccgcggacagagacgcgggcgccaacgcgcag
gtcacctactcgctgctgccgccgcacgacccgcggctgcccctggcctcgctggtgtcc
ctccacgcggccaccgggcagctgttcgcgctcagctccctggacttcgaggcgctgcgc
gcgttcgagttccgcgtgggcgcggccgaccgcggctcgccggcgctcagcagccaggcg
ctggtgcgcgtgctggtgggggacgccaacgacaacgcgcccttcgtgctgtacccgccg
cagaacggctcggcgcgctgccccgagctggtgcccagggcggccgaggcgggctacctg
gtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctggctggcgtaccag
ctgctcagggccacggagcccgggctgttcggcgtgtgggcgcacaacggcgaggtgcgc
acggccaggccgctgagcgcgcgcgacgccgtccggcacaggctgctggtgctggtcaag
gacaacggcgagccgccgctgtcggccagcgtcacgctgcacgtgctgctggtggacggc
ttctcgcagccctacctgccgctcccggccgcggcggcggccgaggcccgggccgacccg
ctcaccgtccacctggtggtggccttggcgtcggtgtcgtcgctcttgctggtggcggtg
ctggggttcgtggcggtgcggctgggcaggaggagccgggccgcggcggggggcggctgc
tcgctgcccgagggccccttcgcgggccacctgcgggacgtcagcggcgcggggaccctg
tcgcacagctaccagtacgaggtgtgtctgacgggaggatctgggaccggcgagttcaaa
ttcttgaagcctatcttccccagtattctgagccaggaccttaggaataagtcagaggga
aatccaaccttccggaatagtaaaaatgtggaaaatctcactgaagagaaatactatgaa
cataagaaatgtggaacaatcttcaattgtccctcatcctttcggcgtgtgtga
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