KEGG   Methanosarcina mazei Go1: MM_0597
Entry
MM_0597           CDS       T00082                                 
Name
(GenBank) DNA-directed RNA polymerase subunit E'
  KO
K15171  transcription elongation factor SPT4
Organism
mma  Methanosarcina mazei Go1
Brite
KEGG Orthology (KO) [BR:mma00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    MM_0597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mma03021]
    MM_0597
   03019 Messenger RNA biogenesis [BR:mma03019]
    MM_0597
Transcription machinery [BR:mma03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     MM_0597
  RNA polymerase I system
     MM_0597
Messenger RNA biogenesis [BR:mma03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     MM_0597
SSDB
Motif
Pfam: Spt4 DZR DZR_2 Prok-RING_4 zf-RING_5 zf-C3HC4_3
Other DBs
NCBI-ProteinID: AAM30293
UniProt: Q8PZ97
LinkDB
Position
728074..728259
AA seq 61 aa
MPEKVCRHCLRVLEGQTCPVCGTSDLAEEWNGLVIILDTERSEIAKRLGVDIPDRFALKV
R
NT seq 186 nt   +upstreamnt  +downstreamnt
atgccagaaaaagtctgtcgacactgcctgagggttctcgaagggcaaacatgtcctgtt
tgcggaacttcagaccttgcagaagaatggaatggacttgttattattcttgataccgaa
cgctcggaaatcgcaaaaagactcggggttgacatcccggatagatttgctttgaaggtg
cgctga

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