Mucilaginibacter mali: HQ865_17575
Help
Entry
HQ865_17575 CDS
T07211
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mmab
Mucilaginibacter mali
Pathway
mmab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HQ865_17575 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmab03021
]
HQ865_17575 (rpoC)
03400 DNA repair and recombination proteins [BR:
mmab03400
]
HQ865_17575 (rpoC)
Enzymes [BR:
mmab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HQ865_17575 (rpoC)
Transcription machinery [BR:
mmab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HQ865_17575 (rpoC)
DNA repair and recombination proteins [BR:
mmab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HQ865_17575 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QKJ31500
UniProt:
A0A7D4UPZ2
LinkDB
All DBs
Position
complement(4199699..4203988)
Genome browser
AA seq
1429 aa
AA seq
DB search
MSYKKDNKIKSNFTTITISLASPESILERSSGEVLKPETINYRTYKPERDGLFCERIFGP
VKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHINLVVPVAHIWYFRSLPNKI
GYLLGLPTKKLDLIIYYERYVVIQPGIKEADGISAMDFLTEEEYLDVLDTLPKENQYLDD
KDPQKFVAKMGAEALEELLKRLDLDQLSYDLRHQAANETSQQRKNEALKRLQVVEAFREA
QGRIENNPEWMIVKIVPVIPPELRPLVPLEGGRFATSDLNDLYRRVIIRNNRLKRLIEIK
APEVILRNEKRMLQEAVDSLFDNSRKVNAVKTEGNRALKSLSDILKGKQGRFRQNLLGKR
VDYSARSVIVVGPNLKLHECGLPKDMAAELFKPFIIRKMIERGVVKTVKSAKKIVDRKDP
LVWDILENVLKGHPILLNRAPTLHRLGIQAFQPKLVEGKAIQLHPLTCTAFNADFDGDQM
AVHVPLGNAAILEAQILMLASHNILNPANGTPITVPSQDMVLGLYYITKGRKTDATRVVK
GENLSFYSAEEVIIAYNEKKLDLHAFIKVKANVKEKDGSIVNKLIDTTVGRVLFNQHVPE
EVGYINELLTKKSLRDIIGEVVKTTGMARAAQFLDDIKELGFQMAFRGGLSFNLKDINIP
AQKVTLIDQASKEVEEVMNNYNMGFITNNERYNQIIDIWTRINNKLTANVMEILSTDNQG
FNSVYMMLDSGARGSKEQIRQLAGMRGLMAKPQKSGSGGEIIENPILSNFKEGLSVLEYF
ISTHGARKGLADTALKTADAGYLTRRLHDVAQDMIVGETDCGTLRGIFTTALKDNEDIVE
PLYDRILGRTSLHEVHDPITGELLVQAGQDITEEIAKNIENSPLEGIEIRSVLTCESKRG
VCALCYGRNLASGKRVQRGEAVGVIAAQSIGEPGTQLTLRTFHVGGTASNIAAESQINAK
YEGIIEFENVRTVSFETPEDGAVDVVLGRSGEFRILEAGSNKVIMTNNIPYGSYLYVKDG
SKINRGDKICSWDPYNAVIISEFAGQVQFDAVLEGVTFREESDEQTGHREKVIIDTRDKS
KNPAIQVVDNKGNLIKGYNIPVGAHIAVDEREKVQTGQVIAKIPRSTGKTRDITGGLPRV
TELFEARNPSNPAVVTEIDGVVTLGGVKRGNREMTIESRDGQVKKYLVPLSKHILVQDND
FVKAGMPLSDGSISPADILAIKGPAAVQEYLVNGIQEVYRLQGVKINDKHFEVIVHQMMQ
KVSIEDPGDTRFLEREAVDGWDFMIENDEIYDKKVVTDPGDSNTLKSGQIVSLRKLRDEN
SVLKRKDMKLVEVRDAIPATSSPILQGITRASLGTKSFISAASFQETTKVLNEAAIAGKR
DSMLGLKENVIVGHLIPSGTGLRIYDNIRVGSQEEFDRLMASKTEEAEA
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaaaaaggataataaaataaaaagcaatttcaccaccattaccatcagttta
gcctcgccagagtctatccttgagcgttcgagcggtgaagttttaaaaccagaaaccatt
aactaccggacctacaagcccgagcgtgatggtttattctgcgagcgtatcttcggtccg
gtaaaagactatgagtgccattgcggtaagtacaaacgtatccgttacaagggtatcgtg
tgcgaccgttgcggtgttgaagtaaccgagaagaaggttcgtcgcgagcgtatgggccac
atcaacctggtggtgcctgttgcgcatatctggtatttccgttcgttaccaaacaaaatt
ggttacctgctgggcttacctactaaaaagctcgacctgatcatctactacgaacgttat
gtagtaattcagccaggtattaaagaagctgacggtatcagtgctatggacttcctgacc
gaggaagaatacctggacgttttggataccctgccaaaagagaaccaatatcttgacgat
aaagacccgcagaaatttgtggccaaaatgggtgccgaagcattggaagaattgctgaaa
cgccttgaccttgaccaattatcatacgatctgcgccaccaggctgcaaacgaaacctca
cagcaacgtaaaaacgaagctttgaagcgcctgcaggttgttgaagctttccgcgaagca
caaggccgtatcgagaataaccctgagtggatgatcgtgaagatcgttccggttatcccg
cctgaactgcgcccgttagtaccactggaaggtggccgtttcgctacttcagatctgaac
gacctttaccgccgtgtaattatccgtaacaaccgtttgaaacgtttgatcgagatcaaa
gcgccggaggtgatcttacgtaacgaaaaacgtatgctgcaggaagctgtggattcgtta
ttcgataactcgcgtaaagttaatgccgttaaaacggaaggtaaccgtgccctgaaatcg
ctctcagacattctgaaaggtaaacaaggccgtttccgtcaaaacttactgggtaaacgt
gttgactactcggcacgttcggtaattgtggtaggccctaaccttaaactgcacgagtgc
ggtttaccaaaagatatggcagccgagctgtttaaaccatttatcatccgcaaaatgatt
gagcgtggtgtggttaaaacagtaaaatctgcaaagaaaattgttgaccgtaaagacccg
ctggtttgggatatccttgaaaacgtactgaaaggccacccgatactgcttaaccgtgcg
cctacgctgcacaggttgggtatccaggctttccagcctaaactggtggaaggtaaagct
atccagctgcacccattaacctgtaccgcgttcaacgccgactttgacggtgaccagatg
gccgtgcacgtaccacttggtaacgcggcaattttggaagcccagatcctgatgctggca
tcgcacaatattttgaaccctgctaacggtacgcctatcactgtaccatctcaggacatg
gtattgggtctttactatattactaagggccgcaaaactgatgctacccgtgttgtaaaa
ggtgaaaacctttcgttctactctgcagaggaagtgatcattgcttacaatgagaaaaaa
cttgacctgcacgctttcattaaagtgaaagctaacgtgaaagagaaagacggcagcatc
gtaaataaactgatcgacactactgtaggccgcgtactgtttaaccagcatgtgcctgaa
gaagtaggttatataaacgaactgctgaccaagaaatcactgcgtgatatcattggcgag
gtagtaaaaactaccggtatggcccgcgcggcccaattccttgatgatattaaggagtta
ggtttccagatggcattccgtggtggtttatcgtttaacctgaaggatattaatatccct
gcacagaaggttaccctgatcgaccaggcttcgaaagaagttgaagaggtaatgaacaac
tataacatgggtttcattaccaacaacgaacgttacaaccagatcatcgatatctggacc
cgtatcaataacaagctgaccgctaacgtaatggagatcctgagtacagataaccagggc
ttcaactcggtttacatgatgcttgattcgggtgcacgtggttctaaagagcagatccgt
cagctggcaggtatgcgtggcctgatggcgaaacctcagaaatcaggttcaggcggcgag
atcatcgagaacccgatcctttcaaactttaaagaaggtctgtcggtattagagtacttt
atctctacccacggtgcccgtaaaggtttggcggatacggcgttaaagacggctgatgct
ggttacctgacccgtcgtttacatgacgttgcgcaggacatgatcgttggcgaaacagat
tgcggtactttacgtggtatcttcaccactgcccttaaagataacgaggacattgttgaa
ccattgtatgaccgtatcctgggccgtacttcattacatgaagtgcacgaccctatcacc
ggcgaactgttagtacaagccggacaggatatcactgaagaaattgccaagaacatcgaa
aactctccgctggaaggcatcgagatccgttcggtattaacctgcgaaagcaaacgtggt
gtttgcgcgctttgctatggccgtaacctggccagtggtaaacgcgttcaacgcggcgag
gctgtaggtgtaattgcagcgcagtcaatcggtgagccgggtacacagttaaccctgcgt
acattccacgtgggtggtaccgcgtctaacatcgcggccgaatctcagatcaacgctaaa
tacgaaggtattatcgaatttgagaacgtacgtaccgtatcattcgaaacgccggaagac
ggagcggtagacgtggtactgggccgttcgggcgaattccgcatcctggaggcaggcagc
aacaaggtgatcatgaccaacaacatcccatacggttcgtacctgtatgtgaaggatggc
agcaagatcaaccgtggcgacaagatctgttcatgggatccgtacaacgcggtaattatc
tctgaatttgccggccaggtacaattcgacgctgtattggaaggtgtaaccttccgcgaa
gaaagcgacgagcaaaccggtcaccgcgaaaaagtaattattgacacccgcgataaatct
aaaaaccctgctatacaggtagttgacaataaaggcaacctgatcaaaggatacaacatc
ccggtaggtgcgcacattgctgttgacgagcgtgagaaggtacaaaccggccaggttatt
gccaagatccctcgttcaaccggtaaaacgcgagatattacaggtggtttgccacgtgta
accgagttattcgaagcacgtaacccaagcaaccctgcggttgtaaccgaaattgacggt
gtggtaaccttaggtggtgtgaaacgtggtaatcgtgagatgaccatcgaatcgcgcgac
ggacaggttaaaaaatacctggtaccactttcaaaacacatccttgtacaggataacgac
tttgtgaaagccggtatgccactgtctgacggttctatctctcctgccgacatcctggct
attaaaggccctgctgccgtgcaagagtacctggtgaatggtatacaagaggtttaccgt
ttacagggtgtgaagatcaacgataagcactttgaggtgatcgttcaccagatgatgcag
aaagtatctattgaagatccgggcgatacccgtttccttgaaagagaagctgttgatggc
tgggactttatgatagagaacgacgagatctacgacaagaaagttgttaccgatccgggc
gattcaaataccctgaaatcaggacagatcgtatcgctgcgtaaactgcgcgatgagaac
tcggtactgaaacgtaaggatatgaagctggttgaagttagggacgctatcccggctact
tcaagccctatcctgcagggtatcaccagggcttcgttaggcaccaagtcgttcatatct
gcggcatcgttccaggaaaccaccaaggtactgaacgaagcagcgatagccggtaagaga
gacagcatgcttggcctgaaagagaacgttatcgttgggcacttaattccgtcaggaacc
gggttgcgtatatacgacaatatccgcgtaggttctcaggaagaatttgaccggctgatg
gcttcgaagaccgaagaagcagaagcataa
DBGET
integrated database retrieval system
