Methanococcus maripaludis DSM 2067: MMJJ_12850
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Entry
MMJJ_12850 CDS
T06430
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mmad
Methanococcus maripaludis DSM 2067
Pathway
mmad02024
Quorum sensing
mmad03060
Protein export
mmad03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mmad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MMJJ_12850 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MMJJ_12850 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MMJJ_12850 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mmad02044
]
MMJJ_12850 (ffh)
Enzymes [BR:
mmad01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
MMJJ_12850 (ffh)
Secretion system [BR:
mmad02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MMJJ_12850 (ffh)
Eukaryotic Sec-SRP protein
MMJJ_12850 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
nSTAND3
CbiA
cobW
AAA_17
Zeta_toxin
NPHP3_N
AAA_30
6PF2K
AAA_16
SLFN-g3_helicase
LpxK
ParA
AAA_33
AAA_25
KTI12
APS_kinase
AAA_24
nSTAND_NTPase5
HTH_1
nSTAND_NTPase7
MobB
NACHT
RNA_helicase
SWI2_SNF2
AAA
AAA_18
DUF6909
GLUCM-like_C
ResIII
Thymidylate_kin
AAA_19
AAA_28
AAA_14
MMR_HSR1
TsaE
MeaB
RHH_3
Motif
Other DBs
NCBI-ProteinID:
AVB76665
UniProt:
A0A2L1CBD5
LinkDB
All DBs
Position
1181565..1182917
Genome browser
AA seq
450 aa
AA seq
DB search
MLDKLGQNLSDALNKLKNATFVDKKLVKEVIKDIQKALIQSDVNVKLVFNMSKEIERKAI
DEAPPKGLSKKEHIVKIVYDELVKLLGETTQKLELDPSKKSVILLIGIQGSGKTTSAAKL
ARYIQKKGLRPGLIAADVYRPAAYQQLKQLSEKINVPLFGDETRTKTPVEITKEGMEKLK
KVDVVIIDTAGRHKEEEGLLAEMKEMKDLTNPNEIILVIDGTLGQQAKNQAKAFKESVSE
IGSILVTKLDGSAKGGGALSAVAEINAPIKFIGTGEGVDNLEQFDPKKFISRILGLGDLD
SLLEKTEDIMDESTEESIDSILKGKFTLIELYAQLETISKMGPMKQILSMIPGMGGNMPK
EAAQLTEAKLKRYKIMMDSMTMEEKENPELIKTSRLQRIAKGAGVKQEEIKDLLKYYSTT
KNAFGNLKRGKMPKMGGQMGQIMRQLMYKD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcttgataaattaggccagaatctctctgatgcactaaacaaacttaaaaacgctact
tttgtcgataaaaaactcgtaaaagaagtaattaaagatattcaaaaggctttaatccag
tccgacgtcaacgtgaaattagtatttaacatgagtaaggaaattgagagaaaagctatc
gacgaagcgcctccaaagggactttcaaaaaaagaacacattgtaaagattgtttacgat
gaactcgtaaaattacttggtgaaaccactcaaaaattagagcttgacccttcaaaaaaa
tctgtaattttacttattggtattcagggaagtggtaaaacaacgagtgctgcaaaactt
gcaagatatattcagaaaaaaggtttaagacccggattaattgcagcagatgtttacagg
cctgcagcataccagcagttaaaacagctttctgaaaaaataaatgttccactatttggt
gacgaaacaagaacaaaaacacctgtagaaatcactaaagaaggaatggaaaaactaaaa
aaagtagatgttgtaatcatcgatacagcaggtaggcacaaggaagaagaaggtctttta
gctgaaatgaaagaaatgaaagatttaacgaatccaaatgagataatccttgtaattgat
ggaactttaggtcagcaggctaaaaatcaagcaaaagcattcaaagaatccgtttcagaa
attggaagtattttggttacaaaattagatggttctgcaaaaggtggtggtgcgttgagt
gctgttgcagaaataaatgctccaattaaatttattggaactggtgaaggggttgataat
ttagaacagttcgacccaaaaaaattcatctccagaattcttggattgggagatttagat
tcccttttagagaaaactgaagatataatggacgaatcaacggaagaaagtattgattct
atcttaaagggtaaatttacattaatcgagctttatgcacagcttgagacaatatccaaa
atgggtcctatgaaacagattttaagcatgattcctggaatgggcggaaacatgccaaaa
gaagctgcacagttaacggaagctaaattaaaaagatacaagatcatgatggactcaatg
acaatggaagaaaaagaaaatcctgaacttataaaaacttcaaggcttcaaagaattgca
aaaggggcaggagtaaaacaggaagaaataaaggatcttttaaaatactattcaacgact
aaaaatgcgtttggaaatttgaagcgcggaaaaatgccaaaaatgggcggacagatgggc
cagatcatgaggcagttaatgtataaggattaa
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