KEGG   Methylophaga marina: GCM100_31350
Entry
GCM100_31350      CDS       T09183                                 
Symbol
nrdA_2
Name
(GenBank) ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
mmaf  Methylophaga marina
Pathway
mmaf00230  Purine metabolism
mmaf00240  Pyrimidine metabolism
mmaf01100  Metabolic pathways
mmaf01232  Nucleotide metabolism
Module
mmaf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
mmaf_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:mmaf00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    GCM100_31350 (nrdA_2)
   00240 Pyrimidine metabolism
    GCM100_31350 (nrdA_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmaf03400]
    GCM100_31350 (nrdA_2)
Enzymes [BR:mmaf01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     GCM100_31350 (nrdA_2)
DNA repair and recombination proteins [BR:mmaf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    GCM100_31350 (nrdA_2)
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: BDZ75416
LinkDB
Position
3080153..3083056
AA seq 967 aa
MASETAQPVYTSSASESGYSVIRRNGKVTEFDSSKIAVAITKAFLAVEGDSAKDSRRIHD
TVAKLTKQVTDNLLRRIDDGGTVHIEDIQDQVELALMREGEYKVARSYVVYREKQSEKRA
EEEKKHPQPANESPLHVTAADGSRQPLDIDRLHNLITEACEGLAEVNRDAILRDTQRNLF
DGVKEADVEKALVMAARTFIEKDPAYSTLAARLLMDGIRREALTFVYKMPKQASQQEMGD
LYSDYFKTYISTAIEKELIDSELGLFDLDRLGNALKPELDFEFTYLGLQTLYDRYFIHFD
GTRFELPQAFYMRVAMGLAINELNREERAIEFYNLLSSFDFMSSTPTLFNSGTLRPQLSS
CYLTTVPDDLSGIYNAMRDNALLSKYAGGLGNDWSRVRGLGAHIKGTNGKSQGVVPFLKV
ANDTAVAVNQGGKRKGAVCAYLETWHIDVEEFLDMRKNTGDDRRRTHDMNTANWIPDLFM
KRVAEEGQWTLFSPEEVEDLHDLTGLDFERAYEAYEEKAARGDIRNFKQLPATDLWRKML
GMLFETGHPWITFKDPCNLRSPQQHVGVVHSSNLCTEITLNTSDKEIAVCNLGSVNMVKH
IDENGQLDKEKLQKTVRTAMRMLDNVIEYNYYSVPQARHSNLQHRPVGLGLMGFQDALYK
LRIPYSSDEAVQFADESMEAISYYAIDASSDLAAERGKYQTYEGSLWSKGILPIDSIKLL
KEARGEYLQQDESKTMDWDMLRDKIKRQGMRNSNTMAIAPTATISNICGVSQSIEPTYQN
LFVKSNLSGEFTVINPYMVEDLKARNLWDDVMINDLKYFDGSLQGIDRIPAELKSLYTTA
FEMDARWLIEAASRRQKWLDQAQSLNLYMAEPSGKKMDNLYKLAWVRGLKTTYYLRSMGA
TGAEKTSTAPTTATEAPAPSKPTAVAAASTPAPVASSSASMDDLVLGEGMEAPKACSILE
PDCEACQ
NT seq 2904 nt   +upstreamnt  +downstreamnt
atggcgagcgaaacagcacaacccgtttatacctcatcagcatccgaaagtggatacagc
gttatccgtcgtaacggtaaagtcaccgagtttgatagcagcaaaattgctgtcgctatc
accaaagcctttttggctgttgaaggtgattcagcaaaagacagtcgtcgtattcacgac
acagttgccaagctgaccaaacaagttaccgacaaccttttacgtcgtattgatgatggt
ggcaccgttcacatcgaagatattcaagatcaggtcgaattagccctgatgcgtgaaggc
gaatacaaagtcgctcgttcttacgttgtatatcgtgaaaaacaatcagaaaaacgtgct
gaagaagaaaagaaacatccccagcctgctaacgaatctcccctgcacgtcacagcagct
gatggctctcgtcaacctctcgacattgaccgtttacacaatctgattacagaagcttgt
gaaggtctggcagaagtaaaccgtgatgcgattttacgcgacacacaacgtaacttgttt
gacggcgttaaagaggctgacgtcgaaaaagcattggttatggctgcacgtaccttcatc
gaaaaagatcctgcctacagcacactggctgctcgcctgctgatggatggtattcgtcgt
gaagcactgacatttgtttacaaaatgccaaaacaagcatcccaacaagaaatgggtgat
ttgtatagtgactatttcaaaacctacatctcaacagcgattgaaaaagaactgattgac
tctgaattaggtttgtttgacttagatcgactgggtaatgcacttaaaccagaattagac
tttgagttcacctacttgggtctgcaaacgttatatgaccgttacttcattcacttcgat
ggtacgcgctttgaattaccgcaagccttctatatgcgtgtcgccatgggcctggctatc
aatgagttaaatcgtgaagagcgcgctatcgagttctacaacttgttatcaagcttcgac
ttcatgagctcgacgcctaccctgttcaactcaggcacactgcgtccacaattatcttca
tgctacctgaccaccgtaccggatgatctgagcggtatttataacgcgatgcgtgataat
gcgctgttatcaaaatatgccggtggtctgggtaatgactggtcacgtgttcgtggtctg
ggcgctcacatcaaaggtaccaatggtaaatcacaaggtgttgtaccgttcctgaaagta
gctaacgacactgctgttgctgtcaaccaaggtggtaaacgtaaaggtgcggtttgtgct
tacttagaaacatggcacatcgacgtcgaagaattcctggatatgcgtaaaaacaccgga
gatgatcgccgtcgtacgcacgatatgaataccgctaactggattccagacttattcatg
aagcgtgtggctgaagaaggtcaatggaccctgttctctccagaagaagtggaagactta
cacgacttaacgggtcttgattttgaaagagcctatgaagcttacgaagaaaaagcggct
cgtggcgatattcgtaacttcaaacaactgcctgcgacagacctatggcgcaaaatgtta
ggcatgctgttcgaaacaggccacccttggatcacatttaaagatccatgtaacctgcgt
agcccacaacagcacgttggtgtggttcacagctcaaacctgtgtacagaaatcaccctg
aacacatcagacaaagaaattgcggtgtgtaacttaggcagcgtcaatatggtgaaacat
attgatgaaaacggtcagctcgataaagaaaaactgcaaaaaaccgttcgtaccgcgatg
cgtatgttagataacgttatcgagtacaactactacagcgtaccgcaagcacgccactca
aacttacagcaccgtcctgtcggtttaggcctgatgggcttccaggatgccctgtacaaa
ctgcgtattccctacagctctgatgaagccgttcaatttgctgatgaatcaatggaagca
atcagctactacgctatcgacgcctcgtctgatttagctgcagaacgtggtaaataccaa
acctacgaaggtagcttatggagcaaaggtatcctgccaatcgattcaatcaaactattg
aaagaagcgcgtggtgaatatctgcaacaagacgaaagcaaaactatggattgggatatg
ctgcgtgacaagatcaaacgtcaaggcatgcgtaactcaaacaccatggcgattgcccca
acagcgacgatttcaaacatctgtggtgtcagccaatccattgagccgacctatcagaac
ctgtttgtgaaatcgaacctgtcaggtgagttcactgttatcaacccatacatggttgaa
gacttgaaagcacgtaacctgtgggatgacgtgatgattaacgatctgaaatacttcgac
ggtagcctgcaaggcatcgaccgtattccagctgagttgaaatcactctacaccaccgca
tttgaaatggatgcacgctggttaattgaagccgcatcacgccgacaaaaatggctggat
caagctcaaagccttaacttatatatggctgaaccatcaggtaagaagatggacaacctt
tataaactggcttgggtacgtggcttgaaaaccacctattacctccgctctatgggggca
acaggtgcagaaaaaaccagcacagcaccaaccacagcaactgaagcgcctgcaccaagc
aagccaacagcagttgccgccgcgagcacgccagcgccggttgccagctcatcagcaagc
atggacgatttagttctaggtgaaggtatggaagcgccaaaagcgtgttcaattttagaa
ccagattgtgaggcatgtcagtaa

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