Mycobacterium mantenii: MMAN_32170
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Entry
MMAN_32170 CDS
T07431
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mman
Mycobacterium mantenii
Pathway
mman03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mman00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMAN_32170 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mman03021
]
MMAN_32170 (rpoB)
03400 DNA repair and recombination proteins [BR:
mman03400
]
MMAN_32170 (rpoB)
Enzymes [BR:
mman01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMAN_32170 (rpoB)
Transcription machinery [BR:
mman03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MMAN_32170 (rpoB)
DNA repair and recombination proteins [BR:
mman03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MMAN_32170 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
BBY39083
UniProt:
A0ABM7JU34
LinkDB
All DBs
Position
complement(3524541..3527894)
Genome browser
AA seq
1117 aa
AA seq
DB search
MIGAPRWREAAAARGDVTPVGGLEEVLYELSPIEDFSGSMSLSFSDPRFDEVKAPVDECK
DKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSP
GVYFDESIDKSTEKLLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGW
TNEQITERFGFSEIMMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKE
KRYDLARVGRYKVNKKLGLHAGEPITSSTLTEEDVVATIEYLVRLHHSRTDGQPAVMTVP
GGTEVPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLI
NIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPS
HYGRMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVSDEIHYLTADEEDR
HVVAQANSPIDSKGRFEESRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLE
HDDANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEKAGVIEEVSADYI
TVMADDGTRHTYRMRKFERSNHGTCANQSPIVDAGARVEAGQVIADGPCTENGEMALGKN
LLVAVMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSD
EVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLK
VPHGESGKVIGIRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKI
LPQEDMPFLPDGTPVDIILNTHGVPRRMNIGQILETHLGWVAKSGWNIDGSPDWAVNLPE
QLRHAQPNQIVSTPVFDGAKEEELQGMLSCTLPNRDGEVMVDGDGKAVLFDGRSGEPFPY
PVTVGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGA
AYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSD
GAAIELREGEDEDLERAAANLGINLSRNESASVEDLA
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
ttgatcggcgcgccgcgctggcgtgaggccgccgccgcccgtggggacgtgactccggtg
ggtggcctggaagaggtgctctacgagctctcgccgatcgaggacttctccggctcgatg
tccctgtcgttctccgacccgcgtttcgacgaggtcaaggcaccggtcgacgagtgcaaa
gacaaggacatgacgtacgcggccccgctgttcgtcaccgccgagttcatcaacaacaac
accggcgagatcaagagccagacggtgttcatgggtgacttcccgatgatgaccgagaag
ggcaccttcatcatcaacggcaccgagcgtgtggtggtcagtcagctggtccgctcgccc
ggtgtgtacttcgacgagagcatcgacaagtcgaccgagaagctgctgcacagcgtcaag
gtgatcccgagccggggtgcctggctggagttcgacgtcgacaagcgcgacaccgtcggc
gtccgcatcgaccgcaagcgccgccagccggtcaccgtgctgctcaaggcgctgggctgg
accaacgagcagatcaccgagcggttcggcttctccgagatcatgatgtcgacgctggag
aaggacaacaccgccggcaccgacgaggcgctgctggacatctaccgcaagctgcgtccg
ggcgagccgccgaccaaggagtccgcgcagaccctgctggagaacctgttcttcaaggag
aagcgctacgacctggcccgcgtgggccgctacaaggtcaacaagaagctcggcctgcac
gccggcgagcccatcacgtcgtcgaccctgaccgaggaagacgtcgtcgccactatcgag
tacctggtgcgcctgcaccactcccgtacggatggccagcccgctgtcatgactgtcccc
ggcggcaccgaggtgccggtggagaccgacgacatcgaccacttcggtaaccgccggctg
cgcaccgtgggcgagctgatccagaaccagatccgggtcggcatgtcccggatggagcgc
gtggtccgggagcggatgaccacccaggacgtcgaggccatcacgccgcagaccctgatc
aacatccggccggtcgtcgccgcgatcaaggagttcttcggcaccagccagctgtcgcag
ttcatggaccagaacaacccgctgtccgggctgacccacaagcgccggctctcggcgctg
ggcccgggcggtctgtcccgtgagcgcgctggcctggaggtccgtgacgtccacccgtcg
cactacggccgcatgtgcccgatcgaaaccccggagggtccgaacatcggcctgatcggg
tcgctgtcggtgtacgcccgggtcaacccgttcgggttcatcgagacgccgtaccgcaag
gtcgtcgacggtgtcgtctccgacgagatccactacctgaccgccgacgaggaggaccgc
cacgtcgtggcgcaggccaactcgccgatcgacagcaagggccggttcgaggagtcacgc
gtcctggtccgccggaaggcgggcgaggtcgagtacgtgccctcgtccgaggtggactac
atggacgtgtcgccgcgccagatggtgtcggtggccacggccatgatcccgttcctcgag
cacgacgacgccaaccgcgccctgatgggtgccaacatgcagcgccaggcggttccgctg
gtgcgcagcgaggcaccgctggtgggtaccggtatggagctgcgtgcggcgatcgacgcc
ggcgacgtggtggtggccgagaaggccggggtgatcgaggaggtctccgccgactacatc
accgtgatggccgacgacggcacccggcacacctaccggatgcgcaagttcgagcggtcc
aatcacggcacctgcgccaaccagtcgccgatcgtcgacgcgggcgcgcgggtcgaggcc
ggccaggtcattgcagacggtccgtgcacggagaacggtgagatggcgctgggcaagaac
ctgctcgtcgctgtcatgccgtgggagggccacaactacgaggacgcgatcatcctctcc
aaccgcctggttgaggaggacgtgctcacctcgatccacatcgaggagcacgagatcgac
gcccgcgacaccaagctgggcgccgaggagatcacccgggacatcccgaacgtctccgat
gaggtgctggccgacctcgacgagcgcggcatcgtgcgcatcggcgccgaggttcgcgac
ggcgacatcctggtcggcaaggtcaccccgaagggtgagaccgagctgacgccggaggag
cggctgctgcgcgcgatcttcggggagaaggcccgcgaggtccgcgacacctccctgaag
gtgccgcacggcgagtccggcaaggtcatcggcatccgggtgttctcccgcgaggacgac
gacgagctgccggccggtgtcaacgagctggtgcgcgtctacgtggcccagaagcgcaag
atctccgacggcgacaagctcgccggacgccacggcaacaagggcgtcatcggcaagatc
ctgccgcaggaggacatgccgttcctgccggacggcacgccggtcgacatcatcctgaac
acccacggtgtgccgcgacggatgaacatcggtcagatcttggagacccacctcgggtgg
gtggccaagtccggctggaacatcgacggctcgcccgactgggcggtcaacctgcccgag
cagctgcggcacgcgcagccgaaccagatcgtgtcgacgccggtgttcgacggcgccaag
gaggaggagctgcagggcatgctgtcctgcacgctgcccaaccgcgacggtgaggtcatg
gtcgacggcgacggcaaggcggtgctgttcgacggccgcagcggggagccgttcccgtac
ccggtgaccgttggctacatgtacatcatgaagctgcaccacctggtggacgacaagatc
cacgcccgttccaccggtccgtactcgatgatcacgcagcagccgctgggtggtaaggcg
cagttcggtggccagcgcttcggtgagatggagtgctgggccatgcaggcctacggcgcc
gcgtacacgctgcaggagctgttgaccatcaagtccgacgacaccgtcggccgggtcaag
gtgtacgaggcgatcgtcaagggcgagaacatcccggagccgggtattcccgagtccttc
aaggtgttgctcaaggagctgcagtcgctctgcctcaacgtcgaggtgctctcctcggac
ggcgcggcgatcgagttgcgcgaaggcgaggacgaagacctcgagcgggcggcggcaaac
ctgggaatcaacctgtcccgcaacgaatctgcgtctgttgaggacctggcttag
DBGET
integrated database retrieval system
