Modestobacter marinus: MODMU_4930
Help
Entry
MODMU_4930 CDS
T02167
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mmar
Modestobacter marinus
Pathway
mmar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MODMU_4930 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmar03021
]
MODMU_4930 (rpoB)
03400 DNA repair and recombination proteins [BR:
mmar03400
]
MODMU_4930 (rpoB)
Enzymes [BR:
mmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MODMU_4930 (rpoB)
Transcription machinery [BR:
mmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MODMU_4930 (rpoB)
DNA repair and recombination proteins [BR:
mmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MODMU_4930 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CCH90310
UniProt:
I4F3U7
LinkDB
All DBs
Position
complement(4919993..4923487)
Genome browser
AA seq
1164 aa
AA seq
DB search
MAGSRPTSTTTTDSSTTPVDVQPGPRTGGTDQQKIPGAPLRVSFAKIREPLEVPDLLALQ
TASFDWLVGSPQWKATLAPEEQADAVGGLAEILEEISPIEDFSGSMSLSFSNPRFEDVKA
SLEECKDKDMTYAAPLFVTAEFMNNTTGEIKSQTVFMGDFPIMTSKGTFVINGTERVVVS
QLVRSPGVYFDKTLDKTSDKDVYSAKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVSVL
LKALGWTEDRIREHFQWSPTMLATLEKDHIAGQDEALLDIYRKLRPGEPPTRESAQALLE
NLFFNPKRYDLAKVGRYKVNKKLGVEVPQGTSTLTEDDIVATIEYVVRLHAGEPEHGVDD
IDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVASIKE
FFGTSQLSQFMDQTNPLAGLTHKRRLSALGPGGLSRERAGMEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLSSFGRVNPFGFIETPYRKVENGQVTDQIDYLTADEEDRFVVAQANSPLD
AQGRLAEERVLVRTKGGEVDYLAPENVDYMDVSPRQMTSVATAMIPFLEHDDANRALMGA
NMQRQAVPLLRSEAPLVGTGMELRAAVDAGDVVVAEKAGVVEDSTADYVTVMADDGTRQT
YRLLKFRRSNQGTSINQSPVVQEGQRVEVGQVIADGPCTDEGEMALGKNLLVAFMPWEGH
NYEDAIILSQRLVQDDVLSSIHIEEFEVDARDTKLGAEEITRDIPNVSEEVLADLDERGI
IRIGAEVVPGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVKHGESGKVIG
VRVFSREDGDELPAGVNELIRVYVAQMRKISDGDKLAGRHGNKGVISKILPQEDMPFLED
GTPVDIVLNPLGVPGRMNVGQVLETHLGWIAKQGWEVEGTPEWAAKLPGAARQAAPGTRT
ATPVFDGAKEDEIIGLLGSTIPNRDGDRMVKETGKARLFDGRSGEPFPEPISVGYVYILK
LLHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYALQELLTIK
SDDILGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSGDGQAIELRDTDD
EVFRAAEELGIDLSRREPSSVEDV
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggctctcgccccaccagcaccaccaccactgatagcagcaccaccccggtcgac
gtccagcccggtccccgcaccggcggtaccgaccagcagaagatccccggcgccccgctc
cgcgtctcgttcgccaagatccgcgagccgctcgaggtcccggacctgctcgccctccag
acggcctcgttcgactggctggtcggcagcccgcagtggaaggccaccctcgcccccgag
gagcaggccgacgcggtcggcggtctggccgagatcctcgaggagatctccccgatcgag
gacttcagcggctccatgtcgctgtccttctccaacccgcgcttcgaggacgtcaaggcg
tccctcgaggagtgcaaggacaaggacatgacctacgcggcgccgctgttcgtcaccgcc
gagttcatgaacaacaccaccggcgagatcaagagccagacggtgttcatgggcgacttc
ccgatcatgacgagcaagggcacgttcgtcatcaacgggaccgagcgcgtggtcgtctcc
cagctggtccgcagcccgggcgtctacttcgacaagaccctggacaagacgtcggacaag
gacgtctacagcgccaaggtcatccccagccgcggtgcgtggctggagttcgacgtcgac
aagcgcgacaccgtcggcgtccggatcgaccgcaagcgccgccagccggtcagcgtcctg
ctcaaggccctcggctggaccgaggaccgcatccgcgagcacttccagtggtcgcccacg
atgctggccaccctggagaaggaccacatcgccggccaggacgaggcgctgctggacatc
taccgcaagctgcgcccgggcgagccgccgacgcgtgagtccgcgcaggcgctgctggag
aacctcttcttcaaccccaagcgctacgacctggccaaggtcggccgctacaaggtgaac
aagaagctcggcgtggaggtgccccagggcacctcgacgctgaccgaggacgacatcgtc
gccaccatcgagtacgtcgtgcgcctccacgccggcgagcccgagcacggcgtcgacgac
atcgaccacttcggcaaccgtcgcctgcgcacggtcggcgagctgatccagaaccagatc
cgggtcggcctctcccgcatggagcgcgtcgtccgcgagcggatgacgacgcaggacgtc
gaggcgatcacgccgcagaccctgatcaacatccggccggtcgtcgcctccatcaaggag
ttcttcggcaccagccagctctcgcagttcatggaccagaccaacccgctcgcgggcctg
acccacaagcgccgcctgtcggcgctgggtccgggcggtctgtcccgtgagcgcgcgggc
atggaggtccgcgacgtgcacccgagccactacggccggatgtgcccgatcgagacccct
gagggcccgaacatcggtctgatcggctcgctgtcctccttcggccgggtgaaccccttc
gggttcatcgagacgccgtaccgcaaggtggagaacggccaggtcaccgaccagatcgac
tacctgaccgccgacgaggaggaccgcttcgtcgtcgcgcaggccaacagcccgctcgac
gcgcagggccgcctcgccgaggagcgggtcctggtccgcaccaagggcggtgaggtcgac
tacctcgctcccgagaacgtcgactacatggacgtctcgccgcggcagatgacctcggtc
gcgacggcgatgatcccgttcctcgagcacgacgacgccaaccgcgccctgatgggcgcg
aacatgcagcgccaggccgtcccgctgctgcgcagcgaggcgccgctggtcggcaccggc
atggagctgcgtgccgccgtcgacgccggcgacgtcgtggtggccgagaaggccggtgtg
gtcgaggactccaccgccgactacgtcaccgtgatggccgacgacgggacccggcagacc
taccggctgctgaagttccgccgctcgaaccagggcacctcgatcaaccagagcccggtc
gtccaggagggccagcgggtcgaggtcggtcaggtcatcgccgacggtccgtgcaccgac
gagggcgagatggcgctgggcaagaacctgctcgtcgccttcatgccgtgggagggccac
aactacgaggacgcgatcatcctgtcgcagcgcctcgtgcaggacgacgtcctgtcctcg
atccacatcgaggagttcgaggtcgacgcccgcgacaccaagctcggcgccgaggagatc
acccgggacatcccgaacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatc
atccggatcggtgccgaggtcgtccccggcgacatcctcgtcggcaaggtcacgcccaag
ggcgagaccgagctgacccccgaggagcggctgctgcgggcgatcttcggtgagaaggcc
cgcgaggtccgcgacaccagcctcaaggtcaagcacggcgagtccggcaaggtcatcggc
gtccgggtcttctcccgcgaggacggcgacgagctgcccgccggcgtgaacgagctcatc
cgggtctacgtggcccagatgcgcaagatcagcgacggcgacaagcttgccggccggcac
ggaaacaagggcgtcatctccaagatcctcccgcaggaggacatgccgttcctcgaggac
ggcacgccggtcgacatcgtgctcaacccgctgggcgtgcccggccggatgaacgtcggc
caggtcctggagacccacctcgggtggatcgccaagcagggctgggaggtcgaggggacg
ccggagtgggccgccaagctgccgggcgctgcgcgccaggccgcgccgggcacccgcacc
gcgacgccggtgttcgacggtgccaaggaggacgagatcatcggcctgctcggctcgacg
atcccgaaccgcgacggcgaccggatggtcaaggagaccggcaaggcgcggctgttcgac
ggccgctccggggagcccttccccgagccgatctcggtgggctacgtctacatcctgaag
ctgctgcacctggtcgacgacaagatccacgcccgttcgaccgggccgtactcgatgatc
acgcagcagccgctgggtggtaaggcgcagttcggtggccagcgcttcggtgagatggag
tgctgggcgatgcaggcctacggcgccgcgtacgcgctgcaggagctgctcaccatcaag
tccgacgacatcctcggccgggtcaaggtctacgaggccatcgtcaagggcgagaacatc
cccgagccgggcatcccggagtcgttcaaggtgttgctcaaggagctccagtcgctctgc
ctgaacgtggaggtcctctccggcgacggccaggcgatcgagctgcgcgacaccgacgac
gaggtcttccgggccgcggaggagctgggcatcgacctgtcccgccgcgagccgtcgtcc
gtcgaagacgtctga
DBGET
integrated database retrieval system
