Malurus melanocephalus (red-backed fairy wren): 130580677
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Entry
130580677 CDS
T09178
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04510
Focal adhesion
mmea04512
ECM-receptor interaction
mmea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130580677 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130580677 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130580677 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mmea00535
]
130580677 (COL9A3)
Proteoglycans [BR:
mmea00535
]
Extracellular matrix (ECM) proteoglycans
Others
130580677 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
130580677
NCBI-ProteinID:
XP_057234308
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search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NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctggattctctgctctggggctcctctccctgtgtcagctcttggctgcagcatca
gctcagtcccttcagagaataggaccacaaggccctcctggaccacgaggaccccctgga
ccatcgggcaaggacggcattgatggagagccaggccctcctggtttgccaggcccccca
gggccaaaaggtgcaccagggaagcctggagcagcaggtgaagcgggattgcctggcctt
cctggagtggatggtttgacaggaactgatggcccacctgggccaagtgggcctccagga
gaccgtggtgcattaggacctgctgggccgcctggacctgctggcaaagggctaccagga
cctccagggcctccaggacccagtgggctcccaggtggacatggatttcggggtccttct
ggaccttttggtctgccaggattcccagggcctcctggaccacctggacctcccggtctt
ccaggcgcccttcctgatgctggtggggacctccagtgcccagctctgtgcccaccaggt
cccccagggcccccaggaatgccaggcttcaagggacacactggtcacaaaggggaacct
ggtgaagtgggaaaacaaggagagaagggtaaccctggccctcctggccctccaggaatt
cctggtggtgttggtctgcagggcccaagaggactgagaggcctccctggtccaatgggt
ccggctggtgacagaggtgacattggattcagaggcccacctggaatcccaggccctcca
gggagggttggagaccaagggagcaaaggacctcagggattccgggggcccaaaggtgac
tctggtaaacctggaccaaaaggaaacccaggggctcgtggactcataggagaacctgga
atgcctggcaaggatgggcgggatggagctcctggactcgatggtgagaagggtgatgca
gctcccatgggtgctcctggagagaaggggccaaatggactccctggactgcctggaaga
gcaggtattaaaggctcaaagggtgaaccaggcagtcctggagtgacaggagagacagga
ccctcaggagagccaggaatccctggcgacgttggcattcctggtgagagaggtctgcca
ggacccagaggagcaactggaccactcggcctccaaggccccataggagctcgtggtgtc
cgaggtttccagggacccaaaggtgccagcggygagcccggccttcctggccccactgga
atccgtggagagacgggggacaggggtcctgttggtgttcctggtcccaaagggaaccag
ggctttgctggagctgatggcctcccaggtgacaaaggagagctgggtccctttggtcct
cccggccaaaaaggagagccaggaagaagaggagaacttggtccaaaaggtgcccaagga
cctaacgggactgctggagcaccagggatcccaggacatccaggacccatgggtcaccag
ggggagaggggtgtccctggcatcacgggaaaacctggacctcctggcaaagaggccagt
gaacaacatatcagagaagtctgtggggaaatgataaatgagcaaattgcccwgttggct
gctaacctgaggaagcccttggctcctggaatgacgggccggcctggcccagcggggccc
ccaggaccccctggatcaacgggaagcattgggcatcctggtcctcgtgggcccccggga
tacagagggccaccaggagagcttggtgatcctggacccagaggtgacactggtgaaaag
ggagataaaggacctgttggccaaggtatcgatgggcctgatggtgatcaaggacttcag
ggaccacctggtgtgcctggaattactaaaaatggccgtgatggtgctcagggtgaaccc
gggctgccaggggatcctgggactcctgggactgtcggggctcagggaactccaggaata
tgtgacacttcggcttgcatgggagctgttgcagcgtcaacttccaaaaaatcataa
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