KEGG   Malurus melanocephalus (red-backed fairy wren): 130584113
Entry
130584113         CDS       T09178                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
mmea  Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130584113 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmea03041]
    130584113 (SF3A1)
Spliceosome [BR:mmea03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    130584113 (SF3A1)
 Complex B
    130584113 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    130584113 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 130584113
NCBI-ProteinID: XP_057239894
LinkDB
Position
Unknown
AA seq 790 aa
MPAGPVQAVPPAQPAPPAESKPPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVAR
NGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQS
AQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLT
QLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQV
YYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEE
LGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTDEPPAQLDQDTQVQDMDEGSDDED
EGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPAS
KMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETA
IGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKE
KIGPSKPNEIPQPPPPSSASNPPPSAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTS
VVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPS
PAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLN
GQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHL
ALKERGGRKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgcccgccggacctgtgcaggctgtgcctccggcgcagcccgcgccccccgctgagagc
aaaccgccagaagaggagcctaaagaggaagcagcaccagccaagcccgtggtgggaatt
atttaccctcctccagaggtcaggaatattgtggacaagactgccagctttgtagccaga
aatggtccagaatttgaagcccgaattcgtcagaatgaaataaataatcccaagttcaac
ttcttgaaccccaatgatccttaccatgcctactaccggcacaaggtcagygagttcaag
gagggcaaggcccaggagccctcagctgccatccccaaggtcatgcagcagcagcagagt
gcccagcagcagcttccacagaaggtgcaggcccaggtgatccaggagacggtggttcca
aaggagcctccgcccgagttcgagttcatcgcggaccctccgtccatctcagcctttgac
ctggacgtggtgaagctcacagcacagtttgtggcccgcaatgggaggcagttcctcacc
cagctcatgcagaaagagcagaggaactaccagtttgatttccttcgcccccagcacagc
ctcttcaactacttcaccaagctggtagagcagtacacaaagatcctgatcccaccgaag
ggcttactcctcaagctcaagaaagaggccgaaaatcccaaagaagtcttggatcaggtc
tattacagagtggagtgggccaagttccaggagcgagagagaaagaaggaagaggaggag
aaggagaaggagcgagttgcttatgcccagattgactggcatgactttgtggttgtggaa
acagttgacttccagcccaacgagcaagggaatttccctcctcccaccactccagaagag
ctgggagctcgaatcctgatccaggagcgttatgagaagtttggggaaagtgaggaggtg
gagatggaggtggagtcagatgaggaagatgaaaagcaagagaaaacagatgagccacca
gcccagctggatcaggacacacaagttcaggacatggatgaggggtcagatgatgaagat
gaaggtcagaaggttcctcctcctccagaaaccccgatgccacccccactccctcccacr
ccagatcaggtcattgtgcggaaagattacgatcccaaagcctcaaaaccgttaccaccc
gccccggctccggatgagtacctcgtgtctcccatcactggggagaagattcccgccagt
aaaatgcaggaacacatgaggattgggctcctggatccacggtggctggagcagcgggat
cgatccatccgggagaagcagagygatgacgaggtctatgccccaggtttggatattgag
agcagcctgaagcagctggccgagcgtcgtactgatatctttggtgtggaagagactgcc
attggtaaaaagattggtgaagaagaaatacagaaaccagaggaaaaggtgacytgggat
ggccactctggcagcatggcccggacacaacaggctgctcaggccaayatcaccctccaa
gagcaaattgaagccatccacaaggccaagggactggtgccagaggatgacagcaaggag
aagattgggcccagcaaacccaacgagataccccagccacctcctccttcctcagcctcc
aacccccctcccagcgcccagcccatcacatctgtgcctcgcccacccaccatgcctcct
cctgtccgtgctgccgtggtttctgcagttcccgttatgccacgtccccccatgacttct
gtggtccggctacctccaggatctgtcatagccacccccatgcctcccataatccacacc
ccacggatcaacgtggtgcccatgcccccctctgctccccccatcatgagcccccgccca
ccccccatgatcgtccccacagcttttgtccctgcgcctcccgtggctccggtcccgtcc
ccggcgccgatgcctcccgttcaccctccaccacccatggaggatgagccagtctccaag
aaactgaagagtgaggatagtctgattccagaggaggaatttctgcgcaggaacaagggc
ccagtcacggtcaaagtccaggttcccaacatgcaggacaagacggaatggaagctgaat
ggccaagtgctggtrttcaccctgcccctctcagaccaggtgtctgttataaaggttaag
atccacgaggccacagggatgccagctgggaagcagaagctgcagtatgagggcatcttc
atcaaggattccaactccctggcttattacaacatgacaagtggctctctgattcacctg
gcactcaaagagagaggaggcaggaagaaatag

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