Methylophilus medardicus: FIU01_10735
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Entry
FIU01_10735 CDS
T10472
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mmec Methylophilus medardicus
Pathway
mmec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU01_10735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmec03400
]
FIU01_10735
Enzymes [BR:
mmec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FIU01_10735
DNA repair and recombination proteins [BR:
mmec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIU01_10735
Prokaryotic type
FIU01_10735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QDC44950
UniProt:
A0A5B8CV52
LinkDB
All DBs
Position
2262024..2262710
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AA seq
228 aa
AA seq
DB search
MRPPTIAATLPASWQPALGRELTQPYMQSLLAFLQQEEAQGKTIFPPAPLIFNAFKHTPF
EKVRVVIIGQDPYHGPGQAHGLSFSVPPGTALPPSLRNIFKELASDLDLPMPGSGDLTPW
ANQGVLLLNAILTVEMAQAGAHQNRGWELFTDAAIAALNTEKTGLVFVLWGSYAQKKGAL
IDPSRHLILQSAHPSPLSAHRGFFGSRPFSAINAHLLRQGQMPIEWAL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccccaacaatcgcagcgaccttaccagcctcttggcaacctgcgctcggccga
gaattgacccaaccctacatgcagtcattgctggcgtttttgcagcaagaagaggcgcag
ggcaaaaccatctttccaccagcgccattgatttttaatgcgtttaaacacacgcctttt
gaaaaagtacgcgtcgtgatcatcgggcaagacccgtatcacgggcccggccaagcccat
ggcctgagtttttcggtgccgcctggcacggcgttgccgccatcactgcgtaacattttc
aaagagcttgcgtcggatttagacctacccatgcctggtagtggcgacttaacgccttgg
gccaaccaaggcgtgctgttgctaaatgcaatcttgactgtagaaatggcgcaggccggg
gcacaccagaaccgtggttgggagttattcacagacgcagccattgccgcattgaatact
gaaaaaaccgggttggtatttgtgttatggggcagctatgcgcaaaaaaagggggccttg
atagaccccagccgacatctgattctgcaatccgcgcacccgtcacctttgtctgcgcat
cgtggctttttcggctcgcggccgttttctgcgattaatgcccatttgctacgccaaggg
cagatgccgattgaatgggcgctctaa
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