Marinobacter metalliresistant: NLK58_18395
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Entry
NLK58_18395 CDS
T10462
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmee Marinobacter metalliresistant
Pathway
mmee03410
Base excision repair
mmee03430
Mismatch repair
mmee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NLK58_18395 (recJ)
03430 Mismatch repair
NLK58_18395 (recJ)
03440 Homologous recombination
NLK58_18395 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmee03400
]
NLK58_18395 (recJ)
DNA repair and recombination proteins [BR:
mmee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NLK58_18395 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NLK58_18395 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NLK58_18395 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
SIS_2
Motif
Other DBs
NCBI-ProteinID:
WZF88256
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All DBs
Position
3950946..3952679
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AA seq
577 aa
AA seq
DB search
MAPKKILRRPQPESLTGWGQKLPPLLRRLYAARGVTSDEQLSYTLKHLASPMSLRGIDRA
VELLAEAIDRQQHVLVLGDFDADGATSTAVAMLGLSMLGLQSIDFRVPSRFADGYGLTPG
IIERLRDEGELPDLMVTVDNGISAVEGVKAARELGVKVVVTDHHLAGEELPDADAIVNPN
QPGCPFLSKNAAGVGVMFYVLTALRKHLRETNRLPNPEPNLGSLLDLVALGTVADVVPLD
HNNRIFVEQGLRRIRQGEARPGILALLEIAGRDHTAISSTDLGFVVGPRLNAAGRLDDMS
IGIACLLADSPDEARRLARELDTFNRERRTIEKEMKVQAQDLLASMSLDLEGLPWGLALF
DPDWHQGVIGILAARIREQTHRPTIAFAPDDNGEDIKGSARSIPGLHIRDVLAVVDCRHP
GIMKKFGGHAMAAGMTLAKADLDAFSEAFDRAVRDTLSAEDLEAAITTDGPLGPGELSLD
TAALLKRAGPWGQHFPEPLFDGEFRVVSQRIVGESHLKLVLQPVDGGGIIDGIAFNTGPE
VPDYTRTGARVVYKPDANTFRGRTNLQLLVDYLEPLS
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaaaaagatcctgcgtcgcccccagccggaatcgcttaccggctgggggcaa
aaactgccccccttgcttcgccgtctgtacgcggcccgcggtgtcacctccgatgagcag
ctgagctataccctgaaacacctggcctcgcccatgtcccttcggggcatagaccgtgcc
gtcgagcttcttgccgaggccattgaccggcagcagcacgttctggtgctcggggatttc
gacgccgacggcgcgaccagtaccgctgtggctatgctcggcctttcgatgctcggctta
cagagtattgattttcgcgttcccagccggtttgctgacggttacggcctgaccccgggc
atcatcgaacggttgcgcgacgaaggcgagcttccggacctgatggtcaccgttgataac
gggatatccgccgttgagggcgtgaaagctgccagggagctgggtgtgaaggtagtggtc
accgatcaccacctggcgggcgaagaacttccggacgccgatgccatcgtcaatcccaat
cagccaggctgccccttcctgagcaagaacgccgccggcgttggcgtgatgttttatgta
cttacggcgttgcgcaaacacctccgggaaaccaatcgtctgcccaacccggagccgaac
ctcggaagcctgctcgatctggtggccctggggacggttgcggatgtggtacccctggat
cacaacaaccgcattttcgtagagcagggcctgcgccggatacgtcagggcgaggcccgc
cctggcattctggccttgctggaaatcgcgggccgggaccatactgccatcagctcaacc
gatctcgggtttgtcgttggcccccgcctgaacgcggctggtcgtctggatgacatgagc
atcggcatcgcctgcctgctggcggacagcccggacgaggcccgccgtctggcccgggag
ctggataccttcaaccgggaacgccggaccatcgaaaaagagatgaaagtccaggcccag
gatcttctcgcctccatgtcactggaccttgaaggtttgccctgggggctggccctgttt
gatcccgactggcatcagggtgtcatcggcattctcgctgcccgcattcgagagcagacc
caccgacccaccatcgcctttgccccggacgacaacggcgaagacatcaaaggctctgcc
cgctccatccccgggctgcacatccgcgatgtactggcggtggtcgattgccgccaccct
gggatcatgaaaaagtttggtggccacgccatggctgcgggcatgaccctcgccaaagca
gacctggacgctttctccgaagccttcgaccgcgccgttcgcgacaccctttcggccgag
gatctggaagccgcgatcaccactgacgggcctctgggcccgggcgaactttctctcgat
accgccgcgctactcaagcgcgccggcccctggggtcagcatttccctgagccgctgttc
gacggcgaattccgggtggtgagccagcgaatcgtcggggaaagccatctgaaactggtg
ttgcagccggtcgatggtggcggcattatcgatggcattgccttcaacaccggtccggaa
gtgcctgactatacccgcaccggggcccgggtggtttacaaaccggatgccaataccttt
cggggccgcaccaatctgcagctcctggtggactatctcgagccgctctcctga
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