Candidatus Mycobacterium methanotrophicum: M5I08_13245
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Entry
M5I08_13245 CDS
T08748
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mmeh03051
]
M5I08_13245 (pafA)
Enzymes [BR:
mmeh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
M5I08_13245 (pafA)
Proteasome [BR:
mmeh03051
]
Prokaryotic proteasome
Bacterial regulatory particles
M5I08_13245 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UQX09394
UniProt:
A0ABY4QFY9
LinkDB
All DBs
Position
2531944..2533302
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDSLVQLVTHDRAGERVLEDLLVDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLIVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAAALCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMCETTTMLKVGSAALVLEMIEAGVAF
RDFSLDNPIRAIREVSHDVTGRRPVRLADGRQASALDIQREYYTRAVEHLQTREPDAQIE
QVVDLWGRQLDAVESQDFAKVDTEIDWVIKRKLFQRYQDRYDMELSDPKIAQLDLAYHDI
KRGRGVFELLQRKGLASRITTDEEIDDAVDQPPQTTRARLRGEFISAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVKRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgccgcattatgggcatcgagaccgaattcggtgtcacgtgcacttttcacggt
catcgtcgcctgtcgcccgacgaggtagcccgctacctgtttcgccgggtggtctcctgg
gggcgcagctccaatgttttcctgcgcaacggcgcacggctgtacctcgacgtgggtagt
catccggaatatgccaccgcggaatgcgacagcctggtgcagctggtcacccacgaccgt
gccggcgagcgggtgctggaagacctgctcgtcgatgccgaacagcggctcgccgacgag
ggcatcggcggcgacatctacctgttcaagaacaacaccgactcggcaggcaactcctac
ggctgccatgagaactacctgatcgtgcgtgcgggcgagttctcgcgcatctccgatgtg
ctgctaccgttcctggtcacccgccagctcatctgtggcgcaggcaaggtgctgcagacc
ccgaaggccgccgcgctctgcctttcgcagcgtgccgagcacatctgggaaggcgtctcc
agtgcgacgacccgatcccgtcctattattaacacccgcgacgaaccccatgccgacgcc
gagaagtaccgccgtctgcacgtcatcgtcggcgactccaacatgtgcgagaccaccacg
atgctcaaggtgggcagcgcagcgctggtactggaaatgatcgaagcgggcgtggcgttc
cgcgacttctcacttgacaacccgatccgggcgatccgcgaggtcagccacgacgtaacc
ggtcggcggccggtgcggcttgccgacgggcgtcaggccagcgccctggacatccaacgg
gagtactacacgcgcgccgtcgagcacctgcaaacccgcgagcccgatgcgcagatcgag
caggtcgtcgacttgtggggccgccagctcgacgccgtggaaagccaggacttcgccaag
gtcgacaccgaaatcgattgggtgatcaagcgcaagttgttccagcgctatcaggaccgc
tatgacatggagttgtccgacccgaagatcgcccaactagatctggcataccacgacatc
aagcgtggccgcggcgtcttcgagctgctgcaacgcaagggcctggcgtcgcgcatcacc
accgacgaagaaatcgacgacgccgtcgaccagccgccgcagaccacccgcgcgcggctg
cgtggcgagttcatcagtgccgcccaggcggccggccgcgacttcaccgtcgactgggtg
catctcaaactcaacgaccaggcccagcgcacggtgttgtgcaaagacccgttccggtcg
gtcgacgagcgggtcaagcggctgatcgccagcatgtaa
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