Mercenaria mercenaria (northern quahog): 123529053
Help
Entry
123529053 CDS
T07835
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04120
Ubiquitin mediated proteolysis
mmer04137
Mitophagy - animal
mmer04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123529053
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123529053
04137 Mitophagy - animal
123529053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123529053
Ubiquitin system [BR:
mmer04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
123529053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
123529053
NCBI-ProteinID:
XP_053377382
LinkDB
All DBs
Position
13:29792161..29796273
Genome browser
AA seq
609 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaacgttgactggaaaaaccattacacttgaggttgagccgtcg
gattccattgaaaatgtgaaagccaagatccaggacaaagaaggcattcccccagatcag
cagagattgatctttgctggcaaacagttggaagatggtcgcacattgtctgactataac
atccagaaggaatccacactccaccttgtgctccgtcttagaggaggtatgcagatcttc
gtgaagaccctcactggcaagaccattacactcgaggttgagccttcagactctattgag
aatgtgaaagccaagatccaggacaaggaaggcattcccccagatcagcagagattgatc
tttgctggcaaacagttggaagatggtcgcacactgtcagattataacattcagaaggaa
tccacactccatcttgtgctccgtctaagaggaggtatgcagatcttcgtgaagaccctc
actggcaagaccattacacttgaggttgagccatcagactctattgagaacgtgaaagct
aagatacaggacaaagaaggcattcccccagatcagcagagattgatctttgctggcaaa
cagttggaagatggtcgcacattatcagactataacattcagaaggaatccacactccat
cttgtgcttcgtctccggggaggtatgcagatcttcgtgaagaccctcactggaaagacc
attacacttgaggttgagccatcagactctattgagaacgtgaaagctaagatacaggac
aaagaaggcattcccccagaccagcagagattgatctttgctggcaaacagttggaagat
ggtcgcacattgtccgactataacatccagaaggaatccacactccatcttgtgcttcgt
ctccgaggaggtatgcagatctttgtaaagacccttactggtaagacgattactctagag
gttgaaccatcagactctattgagaatgtgaaagctaagatccaagacaaggaaggcatt
cccccagatcagcagagattgatctttgctggcaaacagttggaagatggtcgcacattg
tcagattataacattcagaaggaatccactctccatcttgtgctccgtctccggggaggt
atgcagatcttcgtgaagaccctcactggcaagacaattacactcgaggttgagccttca
gactctattgagaatgttaaagccaagatccaggacaaggaaggcattcccccagatcag
cagagattgatctttgctggcaaacagttggaagatggtcgcacactgtcagactataac
attcagaaggaatccacactccatcttgtgctccgtctaagaggaggtatgcagatcttc
gtgaagaccctcactggcaagaccattacacttgaggttgagccatcagactctattgag
aatgtgaaagccaagatccaggacaaagaaggcattcccccagatcagcagagattgatc
tttgctggcaaacagttggaagatggtcgcacactgtcagactataacattcagaaggaa
tccacactccatcttgtgctccgtctaagaggaggtatgcagatcttcgtgaagaccctc
actggcaagaccattacacttgaggttgagccatcagactctattgagaatgtgaaagcc
aagatccaggacaaagaaggcattcccccagatcagcagagattgatctttgctggcaaa
cagttggaagatggtcgcacattgtccgactataacatccagaaggagtccacactccat
cttgtgctccgtctccgaggaggccagtga
DBGET
integrated database retrieval system