Mercenaria mercenaria (northern quahog): 123533716
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Entry
123533716 CDS
T07835
Name
(RefSeq) LIM/homeobox protein Lhx5-like
KO
K18493
LIM homeobox protein 5
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123533716
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
123533716
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
123533716
NCBI-ProteinID:
XP_045171450
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All DBs
Position
12:complement(47657386..47682371)
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AA seq
493 aa
AA seq
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MQLCAGCQGPIVDRYLLNVLDRAWHVRCVQCADCGCALNDKCFSREGKLYCRTDFFRRFG
TKCAGCSQGISPNDLVRKAQNKVFHLKCFTCMICRKQLSTGEELYIVGENKFLCKEDYIQ
NKLEGSDGEEDSMDFDSTLDSQDSEKDVFGDEKSHVMKNNTNQNEDLKAGDMLLDANNSF
NSKFNGSCSSPIKMENGLLSEHHISVKLENGMNSINENTPPSPHSPDINMNCGTTSGPGS
DESVDINDNISCGDINDNDGEANDTNGNHSGPGSKRRGPRTTIKAKQLEVLKAAFNATPK
PTRHIREQLATETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHFFRSPRRMRALRGDL
DDAEMMGPGFGYYNEGEADMYGNFPPYNNFYHGQGPGPEMPPGNMNYMMPNPRGTPPHMD
PGMMASRVGMVPDGQFMPGDILPPSSSPDSMHNIHSEEQFLSNGPGRPMVPPFSSASSLQ
NFPGRPEMTSEVW
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgtgtgccggttgccagggccctattgtggaccgatatttgttgaacgtcctt
gaccgggcttggcacgtgcgctgcgtgcaatgtgcggactgcggctgtgctctaaatgac
aagtgtttttcacgggaaggaaagctttactgtcgcaccgactttttcaggaggttcgga
actaagtgtgcaggatgttcacaagggatttctccaaatgatctcgtgcgaaaagcacag
aataaagtattccatctaaaatgtttcacgtgcatgatttgccggaagcagctctccact
ggggaggaactttatatcgtcggtgaaaacaagttcctgtgtaaggaagactacatacaa
aataaattagaaggttctgatggcgaagaagattcaatggattttgatagcacattagac
agtcaagatagcgaaaaggacgtatttggggatgaaaaatcccatgttatgaaaaataac
acaaaccagaacgaggatttgaaagctggtgatatgttattggacgcaaacaattctttt
aattcaaaatttaacggaagttgttcttcgccaataaaaatggagaacggtttattatca
gagcatcatatttctgtcaaacttgaaaacgggatgaacagcataaatgaaaatacaccg
ccatctcctcatagcccggatattaatatgaattgtgggactacttccggtcccggaagt
gacgaaagcgttgatattaatgacaacatttcctgtggtgatataaacgataatgatgga
gaagcaaatgatacaaatggtaaccattcgggtcccggaagtaagcggcgagggccgcgg
acaacaattaaagccaaacagttggaagttctaaaagcagcgttcaatgccacaccaaaa
cccacccggcatataagagaacaactagcgacagaaacaggactcaatatgagagttata
caggtatggtttcaaaatagacgttccaaagaacgccggatgaaacaacttagtgctctt
ggagccagacgacactttttcagaagtccacggcgcatgcgcgctcttagaggcgacttg
gatgatgctgagatgatggggcccggatttggttattacaacgagggtgaagcagacatg
tatggaaatttcccaccctacaacaatttttaccacggtcaagggccaggaccagaaatg
cccccgggtaacatgaactacatgatgccaaaccctcgaggaactccccctcatatggac
ccaggaatgatggcgtctagagttggtatggttccagatggtcagtttatgccgggagac
atcctaccaccttcctcttcgccagattcaatgcacaacatccattcagaggaacagttc
ttgtcaaacggacccggaagaccgatggttccgccattttcctcagcatcatcattacaa
aattttcccggaagaccagaaatgacatcagaggtgtggtga
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