Mercenaria mercenaria (northern quahog): 123547360
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Entry
123547360 CDS
T07835
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like isoform X1
KO
K05194
glycine receptor alpha-2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123547360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123547360
Ion channels [BR:
mmer04040
]
Ligand-gated channels
Glycine
123547360
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
123547360
NCBI-ProteinID:
XP_045190324
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Position
9:complement(66447978..66491680)
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AA seq
505 aa
AA seq
DB search
MYDAGSESSEHSYIYEILKSTVNLKNFKTGISERSDLDTKMWSPSKTTRNREHVFPHEDS
EETRKSHSRQETNNRRKEDDSMLNALFSRLVESIDRNTEVMQCAMETMDTLSRSSNRTPL
PDDTDFIIPDAKRPDKVLVELKCTFLKINDIDTINQQFEAELFVQAKWEEPLLQQSMFGS
KDKDGEDLDKLIPWDPKLIVMNIDGAFVLNRKTFDIRLHEPGYRYPVVIQLWRFKGFFKE
NLELEHFPVDVQDLTISLSTERSDKEVDLIEDQTSLSSINTKAFMDQEWSLYKHIETSRD
FTTVEYCSSTVHPILHAQCRVARKMGYFVWNIIFIMLLIISLTFAAFTIDFNSADRITVT
ITLFLTAVAFKLVVKQSLPTISYLTYLDVYVIAALIFLGLQAAQNATMNALGHFMIKGEV
QYYDKWSMVLMAIILIVFHIFFALFIYRTASKRRRIMEEKDRMYIGKREFLEKFGTLPPR
YNNGVSDFDYDSIIPGRKMKTSLPR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatgcgggttctgaatcatctgagcatagctatatatatgagattttgaaaagc
actgtgaatttgaaaaacttcaagactgggatatcagaaagatctgacctagacacaaaa
atgtggagtccatctaagaccacgagaaacagagaacatgtattccctcatgaggactct
gaagagacaaggaaatctcatagtagacaagagacaaataatagaagaaaagaggatgac
agtatgttaaatgctttattcagtcgacttgtggagtccatagataggaacactgaggtg
atgcaatgtgccatggagactatggatactttatccaggtcaagcaacagaactccactt
ccagatgatacagattttatcattcctgatgcaaagagaccagataaggttttagtagaa
ctgaagtgtacattcctgaagattaatgatattgatacaattaaccagcaatttgaagct
gaactgtttgtgcaagcaaaatgggaggaacctttactgcagcagagcatgtttggcagt
aaagacaaggatggggaagatttggataaactgataccttgggatcctaaactgattgta
atgaacatagatggagcgtttgtcctcaatcgtaagacatttgacattagattgcacgaa
cctggctatagatatcctgttgtcatacagctgtggcggttcaaaggattcttcaaagaa
aatcttgagctggaacattttcctgtggatgtgcaagatctaacaatatccttgtctaca
gaaagatctgacaaggaagtggacttaatagaagatcagacatctctcagttccatcaat
acaaaagcattcatggatcaggagtggagcctttacaaacatatagaaacttcgagagat
ttcaccactgtagagtactgcagttcaactgtacatccaattcttcatgctcaatgtaga
gtggccaggaagatgggctactttgtatggaatatcatctttattatgttgttgattatc
agtttgacgttcgctgctttcacgattgacttcaacagtgccgacagaattactgtgacc
atcactctgtttcttaccgctgttgcttttaaattggttgtcaaacaaagcctgccaaca
atatcctaccttacatatcttgatgtgtatgtgatagcagcactgatttttctgggtctt
caagctgcccagaatgccacaatgaacgctctaggtcactttatgattaaaggagaggtt
cagtactacgacaaatggtccatggtccttatggctatcattctcattgtatttcatatc
ttctttgcattatttatctacaggacagcatcaaagcgaagaagaataatggaggaaaaa
gatagaatgtatattggaaagcgagagtttttagagaagtttggcacactgccaccaaga
tacaataatggcgttagtgattttgactatgattccatcattccaggcaggaaaatgaaa
acttctcttcccagataa
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