Mercenaria mercenaria (northern quahog): 123549328
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Entry
123549328 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123549328 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123549328
Ion channels [BR:
mmer04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123549328
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
123549328
NCBI-ProteinID:
XP_045193269
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All DBs
Position
6:28088514..28152739
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AA seq
1371 aa
AA seq
DB search
MSNVKQSPSRNKNRSNMSEKGPKTPLIQVTEVFHPDDTDVDNIISPRRLPRSDIPTIGID
NLSFDPSEDVVHRVHEDYNTQRELCDIHTPLPNVPYVFASNRRGSNSNVFVFDPDCVSLY
SRRGSGASRRGSAPTGADKSSLAVPTLKQIRTGDFYDSNVLLPGYNDTSGDSHLPPPRSP
GIISTQSAWSELLNINTCNSRRSSEGGLSDLSRVSNVSSSLSEHLRNLVRAFSSRTEKVK
ECTLQPPSPSSLSDYAGSDALSANAQAQKQMKYLQIRIFDMFAAISAEPQFRRRLDSFLP
DQPEGDTISEIVRIRNESEEEEKKKFKLPRWIRRLKFPHVIEPQSKLYLLWLFIVTLAFM
YNAWAIPLRAAFPYQTPGNVKYWLACDYVCDFIYIVDILLFKMRISFLNSGLKETHRSKT
RANYMQKKMFKFDCLSLLPLDLLYLIEMKVNPWCRLPRVLKIQTFWEFYSRCDHLVRSAH
AVRIMRTFTYMLFLIHVETCGYYAMSVYEGLGVNEWVYNGEGNAYIRCFYLATKTATSIG
NNPTPQNSPEYMFMTVYWVSGVFVFALLIGQIRDIFDASNMVKTTYNHRMDQALNYVKNM
NVPKETQDRVRTWFIYNWQQQKVIDERSMMDALPMKLRKDLAIHVHFNTLSKVKLFSDCD
KTLLYDLVLKLKPILYLPGDYVCKKGEIGKEMYIVSQGIVEVVGGPNNSLVLATLREGSV
FGEISLLAMAAEGNRRTADVRCKGFTNLFILSKVDFENAMKDYPEAHKLLKKRAKKLLRM
NARIERQSQCSVDQSKINATNIIHTPPETPKLVQTVLQVMDPGSTLVRKLSSRRGSKNNG
EVWPSKNSEAPDVADNGADETCPDINNRVKSVTQRDDAEDFYDKMLSDRDWSNEQVKVEN
EVLAKMGGTSGKHRQEGEKDSGEANDLRTNKKTEVKDTGSRENSGVKSPGNSSQKKKTSD
SSTSSSDSGVRDTKVTSPGSSTVRSLSNKDSKDSFNSADLAGILEDDSGDSDSTEPTTNQ
DHSINYTAEMFGDIEAHPSRVKSGRSRRAKKTYRATSGKMGGSSCLLKRNDEYAKAFANG
FTIIIDSVDDKENYSRDCFSPESSDSGEDDTFDCDDLLEDSDDNDQKEQIVKTVTFEDRP
TKENVDTDTTKIVKNKPSSAPLPKTTSVYTKKSTKPVAKPVSAGVSKPCIQSKNKLGLKL
KIENEKTPDFTPYLKSSTGRGKSQTNKARQQYNMSKQKNNSKNTSNGTKPVSGLADRTRT
DKKNGSTVTKVTKDTSPLEVERTNSGGSTRSIAVAEADDSHSVNNVETCSQSPNQVTCFA
DVHREKTMSANSTQEEMVTLFSPDMVASGRQRKISVISIGSVLKDSRETLV
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgttaagcaatctcccagccggaacaaaaacagaagcaacatgagcgaaaag
ggacccaaaactcctcttattcaggtgacagaagtgtttcatccagacgatacagacgtc
gacaatatcatcagccctcgtcggctacctcggtcggacatccccacgatcggtattgac
aacctgtcctttgatcccagcgaggatgttgtacatcgagttcatgaagactataataca
caacgggaactatgtgatatccacacacctctaccaaatgtgccatatgtattcgcttca
aatcgtaggggaagcaactctaatgtgtttgtatttgatccagactgtgttagtttgtat
tccagaagaggaagtggcgcatcgcgaagaggaagtgcaccgacaggggcagataaatca
agtttggctgtccctacacttaaacagatacgcactggcgatttttatgacagcaatgta
ttgttacccggctacaatgacacatccggagattcacacctgccaccaccgcgaagtcca
gggataatcagcactcagagtgcttggagtgagctactgaacataaacacttgcaattca
agacgatcttcggaaggaggactcagtgacctatcacgcgtgtccaatgtcagcagtagc
ctgtctgaacacctaaggaatttggttcgagctttctcaagccgtacagagaaggttaaa
gagtgcacgctgcagccgccaagtccctcctcgttgtccgactacgccggctctgatgca
ctttcggcaaatgcccaagcacaaaagcagatgaaatacttgcaaatccgaatattcgac
atgtttgcagccatttccgccgagcctcaatttcgacgtcggctggactcgttcctgcct
gaccaaccggaaggggatactatctccgagattgtgagaattcgaaatgagtccgaggag
gaagaaaaaaagaaatttaagctgcccaggtggatcaggagattaaaatttccgcatgtt
attgaacctcaaagtaaattatatttactgtggctatttatagtaactttggcattcatg
tataatgcgtgggcaatacctctccgagctgctttcccataccaaaccccgggtaacgta
aagtactggctggcctgtgactatgtttgcgactttatatacatcgttgacatactacta
ttcaaaatgagaatcagttttctcaacagcggacttaaagagacacatcggtcaaaaacg
agggcgaattatatgcaaaagaaaatgtttaaatttgattgtctgtcgttactcccgctg
gatctgttgtatctaattgagatgaaagtgaatccatggtgccgcttaccaagggtgcta
aagatccagacattttgggagttttattcgagatgtgatcatctggtacgatcagcccac
gcagtgagaattatgagaacatttacgtacatgttgtttcttatccacgttgaaacgtgt
gggtactatgccatgtcagtttatgaaggacttggcgtgaatgaatgggtttataacgga
gaagggaatgcctacatacgatgtttttatctggcaacaaaaactgcaacatcaatagga
aacaacccgactccacagaattcaccggaatacatgtttatgacagtctactgggtatct
ggggtgtttgttttcgctcttctcattggtcagatcagagatatctttgatgcatcaaac
atggtaaagacaacgtacaaccacagaatggaccaggcgttgaattacgtgaaaaacatg
aatgttcctaaagaaacgcaagacagagttaggacctggtttatttataactggcaacaa
cagaaagttattgacgaacggtcgatgatggacgccttgccaatgaaactccgtaaagat
ctagctatacatgttcattttaatacattgagcaaggtgaagctgttctccgattgtgac
aagacgttgctctatgaccttgtcttaaagcttaaacccatcttgtatttacctggagac
tacgtttgtaagaagggtgaaattggaaaagagatgtatatcgtcagtcaaggaattgta
gaagttgtagggggtccaaataattcacttgttcttgcaacattgagagaaggatctgtt
tttggagaaataagtcttcttgcgatggcagctgaggggaacagacggactgcggacgta
aggtgtaaaggcttcactaacctgtttatactttcaaaagttgattttgaaaatgcgatg
aaagactaccccgaagctcacaaacttctaaagaaaagagcaaagaaactgcttcgtatg
aatgctagaattgaaagacagagtcagtgttctgtggatcagtcaaagatcaacgctaca
aatatcatacacacaccgccagaaacccctaaactcgtgcagacagtgctacaggtcatg
gaccccggatcgacgcttgtaagaaaattaagctcgagaagaggtagtaagaacaatgga
gaagtatggccatcaaagaattctgaagctccagatgtagccgataacggagctgacgaa
acatgcccagatataaacaatcgagtcaaatctgtcactcagagagatgatgctgaagat
ttttacgacaaaatgctgtctgaccgagactggtcaaatgaacaagtgaaagtagaaaac
gaggtactagcgaaaatgggaggaactagcgggaagcatagacaggaaggcgaaaaggat
agtggcgaagcaaacgatttaagaaccaacaaaaagacggaagtgaaagatactggaagc
agagaaaattcgggagtgaaaagtcctggtaacagctcacagaaaaagaaaacaagcgac
agcagtacgagtagttctgattctggtgtacgagataccaaagtgacgagtcctggatct
agtacagtacggtcactgagcaataaagatagtaaagattcatttaacagtgccgattta
gcagggatactggaagacgactctggagatagtgacagcacggaacctacaacaaatcaa
gatcacagtattaactacacagcagaaatgtttggagatatagaggcacacccaagccga
gttaaatcagggcgtagtcggcgagctaagaaaacatatagagcaactagtggtaagatg
ggaggaagttcttgcctgttaaaacgaaatgatgaatacgccaaagcatttgcaaacgga
tttacaattattatagactctgtagatgacaaggaaaattattcaagagattgtttctca
ccggaatcgtcagactcgggtgaagatgatacttttgattgtgatgatttgttagaagac
agtgatgataatgatcagaaagaacaaatagttaaaacagttacttttgaagataggcct
acgaaagaaaatgttgatacagatactactaaaattgtaaagaataaaccatcgagtgct
ccattaccgaagacaacaagtgtttatacaaagaaatccacaaagccagtggctaaacca
gtctcagcaggagtgagtaagccatgtattcaaagtaagaataaacttggtttaaaatta
aaaatagaaaatgaaaagacccctgattttacaccatatttaaaatcttcaactggtaga
ggaaaatcacagacaaacaaagctcgacagcaatataacatgtctaaacaaaagaataac
agcaaaaatacatcaaacggtacaaaaccagtgtcgggactggctgatagaactcgaact
gacaaaaagaacggaagtacagttactaaggttactaaggacacatcaccactggaagta
gaaagaacaaattccggcggaagtacaagaagtattgctgtagcggaagcggatgacagt
cattctgtcaataatgttgaaacttgttcccagtctccaaatcaagtcacgtgttttgct
gatgtgcatcgagaaaagacgatgtcggcaaattcgactcaagaggaaatggtgacgttg
ttttctcccgatatggtagcatccggaagacagcgcaaaataagtgttatatctattggt
tctgtcttaaaagacagtagggaaacactagtctaa
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