Mercenaria mercenaria (northern quahog): 123554189
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Entry
123554189 CDS
T07835
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03030
DNA replication
mmer03410
Base excision repair
mmer03420
Nucleotide excision repair
mmer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123554189
03410 Base excision repair
123554189
03420 Nucleotide excision repair
123554189
03430 Mismatch repair
123554189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmer03032
]
123554189
03036 Chromosome and associated proteins [BR:
mmer03036
]
123554189
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123554189
DNA replication proteins [BR:
mmer03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123554189
DNA Replication Termination Factors
ELG1-RFC complex
123554189
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123554189
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123554189
Check point factors
HRAD17(Rad24)-RFC complex
123554189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_16
AAA_assoc_2
DNAX_ATPase_lid
AAA_lid_RFC1
AAA_30
AAA_11
AAA_24
AAA_22
Gp44_lid
SLFN-g3_helicase
Mg_chelatase
DUF815
RuvB_N
AAA_7
AAA_18
AAA_19
AAA_5
bpMoxR
TIP49_C
Kinesin
ResIII
Microtub_bd
AAA_28
Motif
Other DBs
NCBI-GeneID:
123554189
NCBI-ProteinID:
XP_045200092
LinkDB
All DBs
Position
7:49388103..49440724
Genome browser
AA seq
359 aa
AA seq
DB search
MHAFLKTGTLGTASKDKSEPGVSKENKEKRKHVPWVEKYRPRRVEDVAFQDEVVAVLKKS
LQGSDLPNLLFYGPPGTGKTSTILAASRELFGDMFKTRVLELNASDERGINVVREKVKTF
SQQSASSVRPDGKPCPPFKIVILDEADSMTGAAQAALRRTMEKQSKTTRFCLICNYVSRI
IEPIASRCAKFRFKPLAEEVLVKRLRHICDEEKIECEDEALKGLLDTSEGDLRKAITFLQ
SASRLKAGDTITQTDIYEIAGVIHDDVIDNLLTVCQSNSYEKLQNCVQDLMNEGHPASQL
ILQLHDKVVQLDELGDKQKSVVMEKLAIVDKCLMDGADEFLQLMALCSVIMKQFCSPDK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcgtttttaaagacaggaactttagggacagcctcaaaagataagtctgaacct
ggagtgtcaaaggaaaacaaagagaagaggaaacatgtaccatgggttgaaaaatatcgg
ccaagacgtgtagaagatgttgcattccaagatgaagttgttgctgtattaaagaaatct
ttacaaggatctgatttacccaatcttctgttctatggaccaccaggcactggaaaaaca
tctacaattttagctgcatcacgggaactcttcggtgatatgttcaagacgagagtgtta
gaactgaatgcatcagatgaaagagggattaatgtcgtaagagagaaagtaaagacgttc
tctcagcaaagtgcgagcagtgttagaccagatggcaagccatgtccaccatttaagata
gtaattcttgacgaggcagattcaatgactggagcagctcaggctgccttgagaagaacc
atggagaagcagtcaaagaccacgagattttgtttgatctgtaactatgttagcaggatt
attgaaccaatagcttctcgttgtgccaagttcagattcaaacctctagcagaagaagtg
ttggtaaaaagactgagacatatctgtgatgaagaaaagattgagtgtgaagatgaggct
ttgaaagggttgttggacacatcagagggtgatctacgtaaagcaattacatttctgcag
agtgcttccaggttaaaggcaggggacaccatcacacaaacagatatatacgaaattgca
ggggtaatacatgatgatgtcatagacaaccttctgaccgtctgccagtccaattcctat
gaaaagcttcaaaactgtgtacaggatttaatgaacgagggccacccagcatcccagctg
attctacagttacatgataaagtggttcagttagacgagcttggagataaacagaagtca
gttgtcatggaaaaacttgctattgtggacaaatgtttgatggatggcgcagatgagttt
ctacagctgatggccttgtgttctgttataatgaagcagttctgctcaccagacaaatga
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