Methylobacterium mesophilicum: MMSR116_30585
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Entry
MMSR116_30585 CDS
T06344
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mmes
Methylobacterium mesophilicum
Pathway
mmes03030
DNA replication
mmes03410
Base excision repair
mmes03420
Nucleotide excision repair
mmes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMSR116_30585 (polA)
03410 Base excision repair
MMSR116_30585 (polA)
03420 Nucleotide excision repair
MMSR116_30585 (polA)
03440 Homologous recombination
MMSR116_30585 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmes03032
]
MMSR116_30585 (polA)
03400 DNA repair and recombination proteins [BR:
mmes03400
]
MMSR116_30585 (polA)
Enzymes [BR:
mmes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMSR116_30585 (polA)
DNA replication proteins [BR:
mmes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MMSR116_30585 (polA)
DNA repair and recombination proteins [BR:
mmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MMSR116_30585 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMSR116_30585 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Taq-exonuc
HHH_2
HHH_5
PUA_4
Motif
Other DBs
NCBI-ProteinID:
QGY05762
UniProt:
A0A6B9FUQ7
LinkDB
All DBs
Position
6339283..6342435
Genome browser
AA seq
1050 aa
AA seq
DB search
MTAETASASPKKVGPGDQVILVDGSSFIFRAYFQSINQDQKYNSRPSDGLPTGAVRLFCT
KIAQFLQDGAAGTMPTHLGIVFDKSEGSFRKEMFPDYKGHRPDAPDDLKRQMPLMRDAVR
AFGLHAVELERYEADDLIATYTRQAEARGAGVIIVSSDKDLMQLVGPQVRFYDFESGAKG
KPGYRPERNLDVEAIIAKWEGLQPNQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEFG
NLEALLERAGEIKQPKRRETLLANVDQAKLSRKLVALMEDVPVPVPLDELGVPKPDPEKL
VGFLKAMEFNTLTRRIAQMLHVDPEAVKPDPRLLPGARPHAYSNGAGGSDAVPFFGDSVP
PDPETAAAGAERPPGAAPPEGGEVDPFADLDLPDAPAKPRAPVEATPGNVVAARAAEAVA
PFDTAAYETVSTLEQLDAWIAEAEEAGVIAVDTETDALDAHRAGLVGVSLAVATGRACYI
PLAHVQAAKVQADATDLFGEGAAPSDVVEPVPGQIPLKEALARLKPLLEHPGVLKVGQNL
KYDWVVLARYGIEVAPFDDTMLISYVLDAGKGGHGMDELARRHLGHQPITFSDVAGTGRN
KVTFDRVAIDKATAYAAEDADVTLRLWRMMKPRLVAEHRVAVYETLERPLLPVIARMEQR
GIRVDRDMLSRLSGDFSQILVRLEEEIQEDAGEKFSVGSPKQIGDILFGKMGLPGAKKTP
SGQWATPATLLEELAQAGHELPKKILEYRQLSKLKSTYTDSLQTHADRETARVHTSFSLA
ATTTGRLSSSEPNLQNIPIRTEEGRRIRRAFVAAPGNRLISADYSQIELRLLAHMADIPE
LRKAFEDGIDIHAATASAMFGVPLKDMTPDLRRRAKTINFGIIYGISAFGLADRLGIGRE
EASAFIKQYFEQFPGIRDYIETTKKSCRDKGFVTTLFGRVCHYPQIRSNNPSERASVERQ
AINAPIQGSAADIIRRAMARMETALAAKKLKAQMLLQVHDELVFEVAEDEVDKAIPVIAS
VMEEAPAPALTLRVPLVVEAKAAGNWQEAH
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgagaccgcctccgcaagtcccaagaaggtcggccccggcgatcaggtgatc
ctggtcgacggctcgtcgttcatcttccgggcctatttccagtcgatcaatcaagaccag
aagtacaattcgcgcccctccgacggcctgcccaccggcgccgtgcggctgttctgcacc
aagatcgcgcagttcctgcaagacggcgcggccggcacgatgccgacccatctcggcatc
gtcttcgacaagtcagagggctcgttccgcaaggagatgttcccggactacaagggccac
cgccccgacgcgcccgacgacctcaagcgccagatgccgctgatgcgcgacgcggtgcgc
gccttcggcctgcacgcggtggagctggaacgctacgaggccgacgacctcatcgccacc
tacacccgccaagccgaggcgcggggcgcgggcgtcatcatcgtctcctccgacaaggac
ctgatgcagctcgtcgggccgcaggtgcggttctacgatttcgagtcgggcgccaagggc
aagcccggctatcggcccgagcgcaacctcgatgtcgaggcaatcatcgccaagtgggag
ggcctgcagccgaaccagatcggcgacgcgctggcgctgatcggcgacacctccgacaac
gtgcccggcgtgcccggcatcggcctcaagaccgcggcggcgctgatcaaggagttcggc
aacctcgaggccctgctggagcgggccggcgagatcaagcagccgaagcgccgcgagacg
ctgctggccaacgtcgaccaggccaagctctcgcgcaagcttgtggcactgatggaggac
gtgccggtcccggtgccgctggacgaactcggcgtgcccaagcccgacccggagaagctc
gtcggcttcctgaaggcgatggagttcaacacgctcacccgccgcatcgcccagatgctg
cacgtcgaccccgaggcagtgaagcctgatccgcgactcctgccgggcgcccggccgcat
gcctacagcaacggcgcgggaggtagcgacgcagtgccgttcttcggcgattccgtgccg
ccggatcccgagacagcggcggccggggccgagcgcccgccgggcgcggctcctccggag
ggcggcgaggtcgaccccttcgccgatctcgacctgcccgacgcccccgccaagccccgg
gcccccgtcgaagcgacgccaggcaacgtggtggcggcacgcgccgccgaggcggtggcg
ccattcgacaccgcggcctacgagacggtctcgaccctggagcagctcgacgcatggatc
gccgaggccgaagaggccggcgtgatcgcggtcgacaccgagaccgatgccctcgacgcc
cacagggccggcctcgtcggcgtctcgctggcggtggcgaccggccgcgcctgctacatc
ccgctcgcccacgtccaggccgccaaggtgcaggccgacgccaccgacctgttcggcgag
ggcgctgcgccctccgacgtggtcgagccggtgccgggccagatcccgctcaaggaggcc
ctcgcgcggctgaagccgctcctggagcatccgggcgtcctgaaggtcgggcagaacctg
aaatacgactgggtcgtgctcgcccgctacggcatcgaggtggcgccgttcgacgacacg
atgctgatctcctacgtgctcgacgccggcaagggcggccacggcatggacgagcttgcc
cgccgccatctcggccaccagccgatcacgttttccgatgtcgccggcaccggccggaac
aaggtgaccttcgaccgggtcgccatcgataaggccaccgcctacgcggccgaggacgcg
gacgtcaccttacgcctgtggcggatgatgaagccgcgcctcgtggcggagcaccgggtc
gcggtctacgagacattggagcggccccttctgccggtgatcgcccggatggagcagcgc
ggcatccgggtcgaccgggacatgctgagccggctctccggcgacttctcgcagatcctt
gtccgcctggaggaggagatccaggaggatgccggcgagaagttctccgtcggctcgccg
aagcagatcggcgacatcctgttcggcaagatgggcctgccgggggccaagaagacaccc
tccggccaatgggcgacgcctgccacgctgctggaggagctggcccaggcgggccacgaa
cttccgaagaagatcctagagtaccgccagctctcgaagctgaaatccacctacacggac
tccctccagacccatgccgatcgcgaaaccgcgcgggtccacacgtcgttctccctggcg
gcgaccacgacggggcgactctcctcctccgagccgaacctgcagaacatcccgatccgc
accgaggagggacggcgcatccgccgcgccttcgtggccgcgcccggcaaccggctgatt
tcggccgactactcgcagatcgagttgcggctcctggcccacatggccgacattccggaa
ctccggaaggccttcgaggacgggatcgacatccacgcggccaccgcctcggcgatgttc
ggcgtgccgctcaaggacatgacccctgacctgcggcggcgggccaagaccatcaatttc
ggcatcatctacggcatctcggccttcgggctggccgaccggctcgggatcggccgcgag
gaggcctcggcgttcatcaagcagtatttcgagcagttcccggggatccgagactacatc
gagacgaccaagaagagttgccgcgacaagggcttcgtgacgaccctgttcggccgggtc
tgccactacccgcagatccgctccaacaacccgtccgagcgcgccagcgtcgagcggcag
gcgatcaacgcgccgattcaaggctcggccgccgacatcatccgccgggccatggcgcgg
atggagacggcgctggcggccaagaagctcaaggcgcagatgctgctgcaggtgcacgac
gagctggtgttcgaggttgccgaggacgaggtggacaaagcgatcccggtgatcgcctcg
gtgatggaggaggcgccggcgcccgcgctgacactgcgggtgccgctggtggtggaggcc
aaggcggctgggaactggcaagaggcgcattga
DBGET
integrated database retrieval system
