Methanosarcina mazei S-6: MSMAS_3316
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Entry
MSMAS_3316 CDS
T04532
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mmj
Methanosarcina mazei S-6
Pathway
mmj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSMAS_3316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmj03019
]
MSMAS_3316
03012 Translation factors [BR:
mmj03012
]
MSMAS_3316
Messenger RNA biogenesis [BR:
mmj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSMAS_3316
Translation factors [BR:
mmj03012
]
Eukaryotic type
Release factors
MSMAS_3316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
Zn_ribbon_LysW
Spectrin_3
DUF1759
Zn_ribbon_TFIIB
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AKB66512
UniProt:
A0A0E3RMR4
LinkDB
All DBs
Position
complement(4099817..4101064)
Genome browser
AA seq
415 aa
AA seq
DB search
MTEQSAHEKYEFKKKLEGLRDKKGRSTELISLYIPPDKQIFDVTNQLKDEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLDKVPENGIVYFTGAVDIGANKTSMESEVIVPPDPITVYKY
HCDSSFYLEPLEDMLKDKNTYGLLVLDRREATIGLLVGKRIQPFRNLTSTVPGKQRKGGQ
SAHRFQQLRLIAIHDFYKRIGDAASEVFMAVDHKDLKGVLIGGPSPTKEEFHAGEFLHHE
LMKKILGLFDTAYTDESGLSELVNAAGEKLQDLELMGQKNAVRDFFKELIADSGKVAYGE
SQVRANLEINSVDVLLLSEDLRAERVTTKCSVCGYENKWTRRWKPGEPAPAAGNCPKCGS
SLEVTDVTDIVDEFSELADKSNAKVVFVSTDFDEGSQLMNAFGGIAAILRYNTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatccgcacatgaaaaatacgaatttaaaaagaagcttgagggtctcagg
gacaagaaaggaagaagcactgagcttatatctctctatatccctcctgataagcaaatt
ttcgatgtcacaaaccagttaaaagacgagcatgggcaggctgctaatatcaagtccaag
cttacgaggacaaatgttcagggggcaatcgagtctctgctttcaaggctcagatacttg
gacaaagtgcctgagaacgggatagtatactttacgggtgctgttgatataggagctaat
aagacgagcatggaaagcgaggtaatcgttcctcctgaccccatcactgtctataagtat
cactgtgattcatctttctatcttgagcctcttgaggacatgcttaaagataagaacact
tacggacttctggttcttgaccgcagggaagcaaccataggtcttcttgtgggaaaaaga
atccagcctttccgcaacctgacatcaacagttccgggaaagcagaggaaaggaggtcag
agtgcccaccgtttccagcagctcaggcttatcgcaatccatgacttttacaagaggata
ggagatgctgcaagtgaagtcttcatggctgttgaccacaaagacctcaagggtgtgctt
attggaggtccctctccgacaaaagaagagtttcatgcaggggagtttttgcaccatgaa
ctcatgaagaaaatccttggactctttgatacggcatacaccgatgaatccgggctttcc
gagcttgttaatgctgcaggtgaaaagcttcaggaccttgaactcatgggccagaaaaat
gctgtcagagactttttcaaggaactgatcgccgattcgggtaaggtagcctacggtgaa
tctcaggtaagggcaaaccttgagattaattctgtggacgtgctcctgctttccgaagat
ctgcgtgcagaaagagtaactacaaaatgcagtgtctgcggatatgaaaacaagtggaca
aggcgctggaaacccggagaacccgcacctgcagcagggaactgtcccaagtgtggctct
tctcttgaggttacggatgttactgatattgttgacgaattctctgagcttgccgacaaa
agtaatgcaaaagtggtcttcgtatccacagactttgatgaaggttctcagctcatgaac
gcctttggaggcatagctgcaatcctgagatacaataccggagtctga
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