Marmota marmota marmota (Alpine marmot): 107139603
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Entry
107139603 CDS
T09644
Symbol
Colec12
Name
(RefSeq) collectin-12
KO
K10062
collectin sub-family member 12
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107139603 (Colec12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107139603 (Colec12)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mmma04091
]
107139603 (Colec12)
Membrane trafficking [BR:
mmma04131
]
Endocytosis
Phagocytosis
Opsonins
107139603 (Colec12)
Lectins [BR:
mmma04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
107139603 (Colec12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COLEC12
Collagen
Lectin_C
Filament
KxDL
SepF
ATG17_like
CCDC39
Fez1
Alpha-2-MRAP_C
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
107139603
NCBI-ProteinID:
XP_015337990
Ensembl:
ENSMMMG00000010551
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYK
VVEKMDNVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKALSTNSELSTFRSDILALRQ
QLHEITEKTSKNKDTLEKLQASGDALVDRQSQLKETLENNSFLITTVNKTLQAYNGYVTN
LQQDTSVLQGNLQNQMYSHNVVMMNLNNLNLTQVQQRNLISNLQRSVDDTSQAIQRIKND
FQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSVLAKANNDTLEDMNSQLNSFTGQMDNI
TTISQANEQNLKDLQDLHKDAENRTAIKFSQLEERFQLFETDIVNIISNISYTAHHLRTL
TSNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDMMRSRLDTEVANLSVI
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPTGNKGQKGEKGEPGPPGP
AGERGPIGPVGPPGERGGKGSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKDGLPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAVAPLALQNEPTL
APEANGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTREEQQWIKKQIVG
RDSHWIGLTDSEQENEWKWLDGKPLDYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDF
QCEDINNFICEKDRETVLSSAL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgacttcgcagaggaggaggaggtgcagtccttcggttacaagaggtttggt
attcaggaaggaacccaatgtaccaaatgtaaaaataactgggcgctgaagttttctatc
atattattatacattttatgtgccttgctaaccatcacagtagccattttgggatataaa
gttgtagagaaaatggacaatgtcacaggtggcatggagacgtctcgccaaacctatgac
gacaagctcactgcggtggaaagtgacctgaaaaaactaggagaccaaactgggaagaaa
gctctaagcaccaactcagaactttccaccttcagatcagatattctggctcttcgtcaa
cagcttcatgagattacagaaaaaaccagcaagaacaaagatacgctggagaaactacag
gcgagcggggatgccctggtggacaggcagagtcaactgaaagaaactttggaaaataat
tctttccttatcaccactgtaaacaaaactctccaggcatataatggctatgtcaccaat
ctgcaacaagataccagcgtgctccagggcaatctgcagaatcaaatgtattctcataac
gtggtcatgatgaacctcaacaacttgaacctgacccaggtgcagcagaggaacctcatc
agtaatctgcagcggtctgtggatgacacgagccaagctatccagcgaatcaagaatgac
ttccaaaatctgcagcaggttttccttcaagccaagaaggacaccgattggctgaaggag
aaagtacaaagcctgcagacgttggctgccaacaactctgtcttggccaaagccaacaac
gacaccctggaggatatgaacagccagctcaactcattcacaggtcagatggacaacatc
accactatctcacaagccaacgagcagaacctgaaagaccttcaggacttacataaggac
gcagaaaatagaacagccatcaagttcagccaactggaggaacgcttccagctctttgag
acagatattgtgaacatcattagtaatatcagctacacggcccaccacctgaggacgctg
accagcaatctgaatgaagtcaggaccacttgcaccgataccctaaccaaacacacagat
gacttgacctccttgaataatacactggccaatatccgtttggattctgtttccctcagg
atgcaacaagatatgatgaggtcaaggttagatactgaagtggccaacttatcggtgatt
atggaagagatgaagctggtggattccaagcatggtcagctcatcaagaattttacaata
ctacaaggtcctcctggccccagaggtccaaaaggtgaccgaggatctcagggaccccct
ggtccaactggcaacaaaggacagaaaggagagaagggggagcctggtccacccggccct
gcaggcgagagaggccccataggaccggttggtcccccgggagagcgtggtggcaaaggc
tccaaaggctcacagggccccaaaggctcccgtgggtcccccgggaaacctggacctcag
ggacccagtggggacccaggccccccaggcccaccaggcaaggacggactccctggcccc
cagggccctcctggcttccagggcctgcagggcactgtgggagaacctggagtgcctgga
ccgcggggactgccgggattgccaggggtgcccggcatgccaggacccaagggccctcct
ggccccccaggcccatcaggagcagtggcacctctggccctgcagaatgagccaaccctg
gcaccagaggccaacggctgtccgcctcactggaaaaacttcacagacaaatgctactat
ttttcggtggagaaagaaatttttgaggatgccaaacttttctgtgaagacaagtcttca
catctcgttttcataaacacaagagaggagcagcaatggataaaaaagcagattgtgggg
agagacagccactggatcggcctcacagactccgaacaggaaaatgaatggaaatggctg
gatgggaagcctctggactacaaaaattggaaagctggacagccagataactggggtcat
ggccatgggccaggagaagactgtgccgggttgatttatgctggacagtggaatgatttc
cagtgtgaagacatcaataacttcatttgcgagaaagacagggagacagtactatcatcc
gcattataa
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