Marmota marmota marmota (Alpine marmot): 107141921
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Entry
107141921 CDS
T09644
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmma04515
]
107141921
Cell adhesion molecules [BR:
mmma04515
]
Cadherins
Protocadherins
107141921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
107141921
NCBI-ProteinID:
XP_015340715
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MEIEWLPNQRQRQVLLFFVLLSLSGAGAELGPYVVVEEMEKGSLVANLVKDLGLELAEMS
TRGARIISQGNKEYLQLKVQTGDLLINEKLEREELCGPTEPCILNFQVLMEKPLEIFQAE
LKVKDINDHSPVFPEREILLKILENSPLGNVFPLNNALDLDVGSNNVQNYQISPNSHFRV
LTYERSNGKKYPQLVLEKELDREEEPELRLTLTALDGGSPPLSGTTQVLIEVVDINDNAP
EFQQPIYKVQIPENSPVGSLVVTVSATDLDGGVYGKIIYMLFQASEDVSKTLELNPMTGE
IRLRKQVDFETVPFYEVDIKATDGGGLWGKCTLLLQVVDVNDNHPAVTMNALTSPIPENS
PEMVVAVFRVSDPDSGNNGKTISSIQEDMPFLLKPSGKNFYTLKTKRALDREEREEYNVT
ITVTDMGTPRLKTQLNITVQVSDINDNAPDFRETSYTLLVHENNQPALHIGSVSATDKDS
GTNAQITYSLLPNQDPNLPLASLVSINADNGQLFALRALDFEALQAFEFHVGATDQGSPP
LSSQALVRVVVLDDNDNPPFLLYPMQNASAPCTELVPRAAEQGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAARHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPLPEVAPERAQEDLLTVYLVIALASVSSLFLFSVLVFVAVRLCRRSRAA
SLGVCSVPEGHFPGHLVDVASTGTLSQSYQQEVCLKGGSATREFKFLKPIIPILPPQCPE
KEIEENSFFHNTFGFNY
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaatggctgccaaatcagagacaaaggcaagtcttacttttctttgttttg
ctgagcttgtctggggcaggcgccgagttgggaccatatgtggtagtggaagaaatggag
aaaggttccttagtggcaaatctagtgaaagacctagggctggagttggcagagatgtcc
acccgaggggcccggatcatttcccaaggaaacaaagagtatttgcagctcaaggttcaa
actggggatttgctcataaatgagaaattagaaagagaggagctatgtgggcccactgag
ccttgtatactaaatttccaagtgttaatggaaaaacccttagagatatttcaggctgaa
ctgaaggtgaaagacataaatgatcattctcctgtgttcccagaaagagaaatacttctt
aaaatactggaaaacagccccctaggaaatgtgttccctctgaataatgctctggacttg
gacgttggaagcaataatgttcagaactatcaaatcagccccaactcccatttccgcgtt
cttacctatgaacgcagcaacggcaagaaatatcctcaactggttttggaaaaagagctg
gatcgagaggaagagcctgaactaagattaaccctgacagctctggatggcggctctcct
ccgctgtctggaaccacacaggtcctcattgaagtggtggacatcaacgataatgcccct
gagtttcagcagccaatctacaaggtgcaaattcctgagaacagcccggtaggttctctg
gtagtcactgtctccgccactgatttagacggtggcgtctatgggaaaataatatatatg
ctctttcaggcttcagaagatgttagcaaaactttggagctaaatcctatgacaggagaa
attcgacttagaaaacaagtagattttgaaacagtcccgttttatgaagtggacatcaag
gctacagacggaggaggtctttgggggaaatgcactcttctcctacaggtggtggatgta
aatgataaccaccccgcagtgaccatgaatgcactcaccagtcccatcccggagaactcc
ccggagatggtggttgctgttttcagagtttcagatcctgactctgggaacaacggaaag
acgatttcctccattcaggaagacatgccctttcttctaaaaccttcaggcaagaacttt
tacaccttgaaaacaaagagagcactagacagagaagaaagagaggaatataacgtgacc
atcacggttacagatatggggacacccagattgaaaacacagcttaacataacagtgcag
gtatcagacatcaacgacaacgcccctgacttcagagaaacctcctacacgctgttagtg
cacgagaacaaccagcccgccctgcacataggcagtgtcagcgctacagacaaagactca
ggcaccaatgcccagatcacctactcactgctgccaaaccaggacccaaacctgcccctc
gcctcgctggtctccatcaacgcagacaatgggcagctgttcgcgctgagggcgctggac
ttcgaggccctgcaggcgttcgagttccacgtgggcgccacagaccaaggttcgcccccg
ctcagcagccaggcgctggtgcgagtggtggtgctggacgacaatgacaacccacccttc
ctgctgtacccaatgcagaacgcctctgcgccctgcacggagctggtgcccagggcggca
gagcagggctacctggtcaccaaggtggtggcggtggatggagactcgggccagaacgcc
tggctgtcataccagctgctcaaggccacggagccagggctgtttggcgtgtgggcgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaggcacaggctg
gtggtgctggtcaaggacaatggcgagcctccgctgtctgccagcgtcacgctgcacgtg
ctgctggtggatggcttctcccagccctacctgccgctcccggaagtggcgcccgagcgc
gcgcaggaggacttgctcactgtctatttggtcattgctttggcctctgtgtcatcgctc
ttcctgttctctgtgctggtgttcgtggcggtgaggctgtgcaggaggagcagggcggca
tcgctaggtgtgtgttctgtgcctgagggccactttccgggccacctggtggatgtcgcc
agcactggcactctgtcccagagttaccaacaagaggtgtgtctgaagggaggttctgcg
accagggagtttaagttcttgaagccaattatccccatcctcccgccccagtgccctgag
aaagaaatagaggaaaattctttcttccacaatacttttggatttaattattga
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